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km-kill-lags branched off frosting.#77

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kenmawer merged 31 commits intofrostingcmu-delphi/epipredict:frostingfrom

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Jul 8, 2022

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Commits on Jun 28, 2022

• km-kill-lags branched off frosting.

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Commits on Jun 30, 2022

• Merge branch 'frosting' of https://github.com/cmu-delphi/epipredict into km-kill-lags-good

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• Documented changes.

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• Merge branch 'frosting' into km-kill-lags-good

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• Still need to fix process to get proper get_test_data

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• Fixed issue of get_test_data.

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• Refactored to fix errors. Note that warning comes from absence of defined `step_epi_naomit()` here.

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Commits on Jul 4, 2022

• Merge branch 'frosting' of https://github.com/cmu-delphi/epipredict into km-kill-lags-good

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• Updated functions to be consistent with style and changed those that use inappropriate integers to throw an error.

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• Integer error checking done at create time.

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• Updated integer checking to work at creation time and replaced check for lead/lag based on shift.

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• Removed erroneous #TODO comment

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• Deleted random code I put in on a test.

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• Merge pull request #85 from cmu-delphi/km-kill-lags-good2

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Commits on Jul 5, 2022

• A few updates. Note, however, that there is no unambiguous distinction for a shift of 0 with lead vs. lag, unless I put a third if/else for the shift == 0 case.

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• Added a class parameter that unambiguously distinguishes "lag" from "ahead" from when the function is called.

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Commits on Jul 6, 2022

• Vague parameter `class` refactored to `intended_direction`.

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• Solution involving swapping subclass vector arguments.

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• Fixed print statement.

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• This code runs properly.

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• Fixed issue of extra lines.

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• Functions run, but print is brokoen

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• Merge branch 'frosting' of https://github.com/cmu-delphi/epipredict into km-kill-lags-good

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• Updated with pull; devtools::check() claims no errors or warnings, but it fails on GitHub.

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• Tentative solution for printing to enable printing to work as it should. Preferably, the printing statements should be separated by lag and ahead.

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• Fixed erroneous printing.

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Commits on Jul 8, 2022

• Merge branch 'frosting' of https://github.com/cmu-delphi/epipredict into km-kill-lags-good

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• printing works, now we refactor

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• refactor done

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• update the examples

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• checks pass, improve file naming

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