deploy with Jupyter + version control #110
Merged
Conversation
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
* update the welcome page to indicate this is the python version, include links to the R version * minor edits (newline for better diffs) Co-authored-by: Trevor Campbell <[email protected]>
* Update _config.yml * Update repo and branch info * Make some visible changes * Include packages we actually use and updated jupyterbook to fix netlify * Test rebuilding notebooks again * Fix typo * Update ToC * Add ibis * Always execute all notebooks * Delete requirements.txt * Update source/_config.yml * Update source/_config.yml * Change path and branch * Increase timeout
* wip on ch3
* working on wrangling chapter
* move chaining content to the intro
* update content on summary statistics
* update the disucssion on apply
* remove the discussion on What is a List
* move the assign content to the very end
* minor wordsmithing on welcome page
* edited learning objs in ch1 for new chaining
* update discussion on chaining, edits from Trevor
* update discussion of split
* remove unnecessary call to File: dir Node: Top This is the top of the INFO tree
This (the Directory node) gives a menu of major topics.
Typing "d" returns here, "q" exits, "?" lists all INFO commands, "h"
gives a primer for first-timers, "mEmacs<Return>" visits the Emacs topic,
etc.
In Emacs, you can click mouse button 2 on a menu item or cross reference
to select it.
--- PLEASE ADD DOCUMENTATION TO THIS TREE. (See INFO topic first.) ---
* Menu: The list of major topics begins on the next line.
Emacs
* Ada mode: (ada-mode). The GNU Emacs mode for editing Ada.
* Autotype: (autotype). Convenient features for text that you enter frequently
in Emacs.
* CC Mode: (ccmode). Emacs mode for editing C, C++, Objective-C,
Java, Pike, and IDL code.
* CL: (cl). Partial Common Lisp support for Emacs Lisp.
* Dired-X: (dired-x). Dired Extra Features.
* EUDC: (eudc). A client for directory servers (LDAP, PH)
* Ebrowse: (ebrowse). A C++ class browser for Emacs.
* Ediff: (ediff). A visual interface for comparing and merging programs.
* Emacs: (emacs). The extensible self-documenting text editor.
* Emacs FAQ: (efaq). Frequently Asked Questions about Emacs.
* Emacs MIME: (emacs-mime). The MIME de/composition library.
* Eshell: (eshell). A command shell implemented in Emacs Lisp.
* Forms: (forms). Emacs package for editing data bases
by filling in forms.
* Gnus: (gnus). The newsreader Gnus.
* IDLWAVE: (idlwave). Major mode and shell for IDL and WAVE/CL files.
* MH-E: (mh-e). Emacs interface to the MH mail system.
* Message: (message). Mail and news composition mode that goes with Gnus.
* PCL-CVS: (pcl-cvs). Emacs front-end to CVS.
* RefTeX: (reftex). Emacs support for LaTeX cross-references and citations.
* SC: (sc). Supercite lets you cite parts of messages you're
replying to, in flexible ways.
* Speedbar: (speedbar). File/Tag summarizing utility.
* VIP: (vip). An older VI-emulation for Emacs.
* VIPER: (viper). The newest Emacs VI-emulation mode.
(also, A VI Plan for Emacs Rescue
or the VI PERil.)
* Widget: (widget). Documenting the "widget" package used by the
Emacs Custom facility.
* WoMan: (woman). Browse UN*X Manual Pages `Wo (without) Man'.
Texinfo documentation system
* Info: (info). Documentation browsing system.
Miscellaneous
* Screen: (screen). Full-screen window manager.
* Standards: (standards). GNU coding standards.
GNU admin
* Autoconf: (autoconf). Create source code configuration scripts
Individual utilities
* aclocal: (automake)Invoking aclocal. Generating aclocal.m4
* autoconf: (autoconf)autoconf Invocation.
How to create configuration scripts
* autoreconf: (autoconf)autoreconf Invocation.
Remaking multiple `configure' scripts
* autoscan: (autoconf)autoscan Invocation.
Semi-automatic `configure.ac' writing
* config.status: (autoconf)config.status Invocation.
Recreating a configuration
* configure: (autoconf)configure Invocation.
Configuring a package
* ifnames: (autoconf)ifnames Invocation.
Listing the conditionals in source code
GNU programming tools
* automake: (automake). Making Makefile.in's
Utilities
* Bash: (bash). The GNU Bourne-Again SHell.
GNU Packages
* Tar: (tar). Making tape (or disk) archives.
Individual utilities
* tar: (tar)tar invocation. Invoking GNU `tar'
Software development
* Cpp: (cpp). The GNU C preprocessor.
* Cpplib: (cppinternals). Cpplib internals.
* gcc: (gcc). The GNU Compiler Collection.
* gccinstall: (gccinstall). Installing the GNU Compiler Collection.
* gccint: (gccint). Internals of the GNU Compiler Collection.
* gfortran: (gfortran). The GNU Fortran Compiler.
GNU Libraries
* libgomp: (libgomp). GNU OpenMP runtime library
Programming & development tools
* gdbm_dump: gdbm_dump(gdbm). Dump the GDBM database into a flat file.
* gdbm_load: gdbm_load(gdbm). Load the database from a flat file.
Utilities
GNU libraries
* gmp: (gmp). GNU Multiple Precision Arithmetic Library.
Software libraries
* GnuTLS: (gnutls). GNU Transport Layer Security Library.
* GnuTLS-Guile: (gnutls-guile). GNU Transport Layer Security Library. Guile bindings.
* libidn2: (libidn2). Internationalized domain names (IDNA2008/TR46) processing.
* libtasn1: (libtasn1). Library for Abstract Syntax Notation One (ASN.1).
* mpfr: (mpfr). Multiple Precision Floating-Point Reliable Library.
GNU Packages
* mpc: (mpc)Multiple Precision Complex Library.
Development
* fftw3: (fftw3). FFTW User's Manual.
Individual utilities
* aclocal-invocation: (automake)aclocal Invocation. Generating aclocal.m4.
* autoconf-invocation: (autoconf)autoconf Invocation.
How to create configuration scripts
* autoheader: (autoconf)autoheader Invocation.
How to create configuration templates
* autom4te: (autoconf)autom4te Invocation.
The Autoconf executables backbone
* automake-invocation: (automake)automake Invocation. Generating Makefile.in.
* autoreconf: (autoconf)autoreconf Invocation.
Remaking multiple ‘configure’ scripts
* autoscan: (autoconf)autoscan Invocation.
Semi-automatic ‘configure.ac’ writing
* autoupdate: (autoconf)autoupdate Invocation.
Automatic update of ‘configure.ac’
* config.status: (autoconf)config.status Invocation. Recreating configurations.
* configure: (autoconf)configure Invocation. Configuring a package.
* ifnames: (autoconf)ifnames Invocation. Listing conditionals in source.
* libtool-invocation: (libtool)Invoking libtool. Running the 'libtool' script.
* libtoolize: (libtool)Invoking libtoolize. Adding libtool support.
* testsuite: (autoconf)testsuite Invocation. Running an Autotest test suite.
Software development
* Autoconf: (autoconf). Create source code configuration scripts.
* Automake: (automake). Making GNU standards-compliant Makefiles.
* Automake-history: (automake-history). History of Automake development.
* GNU libtextstyle: (libtextstyle). Output of styled text.
* GNU libunistring: (libunistring). Unicode string library.
* Libtool: (libtool). Generic shared library support script.
Localization
* idn2: (libidn2)Invoking idn2. Internationalized Domain Name (IDNA2008/TR46) conversion.
Encryption
* Nettle: (nettle). A low-level cryptographic library.
System Administration
* certtool: (gnutls)certtool Invocation. Manipulate certificates and keys.
* gnutls-cli: (gnutls)gnutls-cli Invocation. GnuTLS test client.
* gnutls-cli-debug: (gnutls)gnutls-cli-debug Invocation. GnuTLS debug client.
* gnutls-serv: (gnutls)gnutls-serv Invocation. GnuTLS test server.
* psktool: (gnutls)psktool Invocation. Simple TLS-Pre-Shared-Keys manager.
* srptool: (gnutls)srptool Invocation. Simple SRP password tool.
Libraries
* libgpg-error: (gnupg). Error codes and common code for GnuPG.
GNU Libraries
* libgcrypt: (gcrypt). Cryptographic function library.
C++ libraries
* autosprintf: (autosprintf). Support for printf format strings in C++.
GNU Gettext Utilities
* ISO3166: (gettext)Country Codes. ISO 3166 country codes.
* ISO639: (gettext)Language Codes. ISO 639 language codes.
* autopoint: (gettext)autopoint Invocation. Copy gettext infrastructure.
* envsubst: (gettext)envsubst Invocation. Expand environment variables.
* gettext: (gettext). GNU gettext utilities.
* gettextize: (gettext)gettextize Invocation. Prepare a package for gettext.
* msgattrib: (gettext)msgattrib Invocation. Select part of a PO file.
* msgcat: (gettext)msgcat Invocation. Combine several PO files.
* msgcmp: (gettext)msgcmp Invocation. Compare a PO file and template.
* msgcomm: (gettext)msgcomm Invocation. Match two PO files.
* msgconv: (gettext)msgconv Invocation. Convert PO file to encoding.
* msgen: (gettext)msgen Invocation. Create an English PO file.
* msgexec: (gettext)msgexec Invocation. Process a PO file.
* msgfilter: (gettext)msgfilter Invocation. Pipe a PO file through a filter.
* msgfmt: (gettext)msgfmt Invocation. Make MO files out of PO files.
* msggrep: (gettext)msggrep Invocation. Select part of a PO file.
* msginit: (gettext)msginit Invocation. Create a fresh PO file.
* msgmerge: (gettext)msgmerge Invocation. Update a PO file from template.
* msgunfmt: (gettext)msgunfmt Invocation. Uncompile MO file into PO file.
* msguniq: (gettext)msguniq Invocation. Unify duplicates for PO file.
* ngettext: (gettext)ngettext Invocation. Translate a message with plural.
* xgettext: (gettext)xgettext Invocation. Extract strings into a PO file.
The Algorithmic Language Scheme
* Guile Reference: (guile). The Guile reference manual.
* R5RS: (r5rs). The Revised(5) Report on Scheme.
* take care of colons preceding code blocks
* take care of chapter references
* add discussion of lists and dicts
* add table and discussion on basic data structures in python:
* add description of info
* some general cleanup in apply, assign
* typo fix in the intro
* a couple of type fixes:
* polish chaining/multiline exps
* polish ch3 up to and incl tidy data
* polish indexing
* more polish ch3
* fix python exercises link
* more on groupby
* improve groupy and discussion of lambda functions
* try re-ordering the assign and apply content
* global find replace to remove . in naming conventions
* caption on fig24 fixed
* polish up to apply
* cleanup through Using to create new columns
* through the summery
* add :tags: [output_scroll] for large code outputs, change figure types
* trim vertical whitespace on figures:
* Update source/wrangling.md
Co-authored-by: Joel Ostblom <[email protected]>
* Apply suggestions from code review
Co-authored-by: Joel Ostblom <[email protected]>
* polishing ch3
* final polish on wrangling
* final polish on ch3 joel comments
Co-authored-by: Trevor Campbell <[email protected]>
Co-authored-by: Joel Ostblom <[email protected]>
* code formatting for viz * update viz chapter * updating the viz chapter * comments addressed through faithful dataset * more progress on the viz chapter (part way through morley data) * add back code to create the csv for mauna_loa * a couple minor typo fixes * polishing ch4 * minor polish on ch4 * code tags in learning objs * polish on ch4, fixed number -> percentage in figure labels * re-added other filetypes... * better line formatting in saving section * ignore altair warnings; committed faithful plots * moved faithful plots to img/ * done polishing ch4 Co-authored-by: Trevor Campbell <[email protected]>
* preface python * remove foreword * added editors page * fix appendix,references * added py acks * minor ed * Update editors.md add Lindsey bio * Add joels bio Co-authored-by: Lindsey Heagy <[email protected]> Co-authored-by: Joel Ostblom <[email protected]>
* first figures in ch1: * code figures for ch1, including ppt to edit them * update figure sizes * remove old lingering image * removed hidden pptx cache file Co-authored-by: Trevor Campbell <[email protected]>
* update output scrolling for ch2 * update scrolling of large output tables
* figure polishing for ch3 * more ch3 figures
* added jupyter and version control back in * converted bookdown to jupyterbook images in jupyter chapter * jupyterbook index entries in jupyter * fig references to jupyterbook in jupytermd * updated unicode characters in jupyter; added a caveat at the beginning regarding images * initial index and figure template add to version control * R -> Python in version control * fixed figure refs bookdown->jupyterbook in vsn ctl * jupyterbook index style vsn ctl * fixed images in vsn ctl * minor polish * added caveat * Update source/version-control.md * admonitions for caveats Co-authored-by: Lindsey Heagy <[email protected]>
* remove the visible call of in the saving section * remove size calculation code
trevorcampbell
approved these changes
Jan 7, 2023
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
No description provided.