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Dirichlet mixture of multinomials example #18

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Merged
merged 15 commits into from
Jan 27, 2021
Merged

Dirichlet mixture of multinomials example #18

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6179812
Add a simple simulated-data example for DM distribution.
bsmith89 Dec 29, 2020
73ce358
Update DM example to conform to style-guide.
bsmith89 Jan 4, 2021
0be4166
Use InferenceData object for both posterior and ppc data storage.
bsmith89 Jan 4, 2021
ed9df30
Update notebook workflow with new PPC code and null (multinomial) model.
bsmith89 Jan 18, 2021
d5e6613
Big update to DM example text.
bsmith89 Jan 23, 2021
a8cea42
Incorporate suggestions from @AlexAndorra, @ricardoV94, and @MarcoGor…
bsmith89 Jan 23, 2021
8d5041c
Drop unused imports.
bsmith89 Jan 23, 2021
86a075a
Additional revisions suggested by @ricardoV94
bsmith89 Jan 23, 2021
c8c61b9
Clean up syntax of (dirichlet)multinomial explanation.
bsmith89 Jan 24, 2021
2b69806
More consistent variable names across simulation, models, text.
bsmith89 Jan 24, 2021
8eceefb
Even fancier PPC plots.
bsmith89 Jan 24, 2021
1067cb0
Additional minor revisions, TODOs.
bsmith89 Jan 25, 2021
b18cd9a
Revisions, also use forest-plots to examine accuracy of inferences.
bsmith89 Jan 25, 2021
2fbe188
Fix some text and figures.
bsmith89 Jan 25, 2021
b958efa
Re-emphasize issues when NUTS fails.
bsmith89 Jan 25, 2021
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1,360 changes: 1,360 additions & 0 deletions examples/mixture_models/dirichlet_mixture_of_multinomials.ipynb
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1 change: 1 addition & 0 deletions examples/table_of_contents_examples.js
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Expand Up @@ -39,6 +39,7 @@ Gallery.contents = {
"variational_inference/gaussian-mixture-model-advi": "Mixture Models",
"mixture_models/gaussian_mixture_model": "Mixture Models",
"mixture_models/marginalized_gaussian_mixture_model": "Mixture Models",
"mixture_models/dirichlet_mixture_of_multinomials": "Mixture Models",
"samplers/SMC2_gaussians": "Simulation-based Inference",
"samplers/SMC-ABC_Lotka-Volterra_example": "Simulation-based Inference",
"survival_analysis/bayes_param_survival_pymc3": "Survival Analysis",
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