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Merged
merged 11 commits into from
Dec 30, 2019
Merged

Handle streamtube coordinates in string format and handle different data orders in isosurface and volume #4431

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07ce3d2
fix issue 4427 - streamtube should handle string values
archmoj Dec 18, 2019
942f92f
streamtube - no need for casting typed arrays to numbers
archmoj Dec 21, 2019
d015b57
create a reusable process grid function
archmoj Dec 24, 2019
5a95dab
Apply streamtube processGrid in isosurface and volume
archmoj Dec 24, 2019
1f0ee0f
improve test image for isosurface
archmoj Dec 25, 2019
990cdda
match isosurface value in the mock to be equal to sqrt(u2+v2+w2)
archmoj Dec 25, 2019
b71677a
pass len to distictVals and filter to help improve the performance
archmoj Dec 27, 2019
6d06229
add an image test for volume with different fill orders
archmoj Dec 27, 2019
df9b4c4
cast x, y, z, u, v, w, values to numbers at the start of calc and sto…
archmoj Dec 27, 2019
41504aa
remove extra cast operations
archmoj Dec 29, 2019
c82da07
rewrite without forEach
archmoj Dec 30, 2019
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66 changes: 44 additions & 22 deletions src/traces/streamtube/calc.js
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -25,11 +25,14 @@ module.exports = function calc(gd, trace) {
var slen = 0;
var startx, starty, startz;
if(trace.starts) {
startx = trace.starts.x || [];
starty = trace.starts.y || [];
startz = trace.starts.z || [];
startx = filter(trace.starts.x || []);
starty = filter(trace.starts.y || []);
startz = filter(trace.starts.z || []);
slen = Math.min(startx.length, starty.length, startz.length);
}
trace._startsX = startx || [];
trace._startsY = starty || [];
trace._startsZ = startz || [];

var normMax = 0;
var normMin = Infinity;
Expand Down Expand Up @@ -61,13 +64,18 @@ module.exports = function calc(gd, trace) {
var filledX;
var filledY;
var filledZ;
var firstX;
var firstY;
var firstZ;
var firstX, lastX;
var firstY, lastY;
var firstZ, lastZ;
if(len) {
firstX = x[0];
firstY = y[0];
firstZ = z[0];
firstX = +x[0];
firstY = +y[0];
firstZ = +z[0];
}
if(len > 1) {
lastX = +x[len - 1];
lastY = +y[len - 1];
lastZ = +z[len - 1];
}

for(i = 0; i < len; i++) {
Expand All @@ -80,15 +88,15 @@ module.exports = function calc(gd, trace) {
zMax = Math.max(zMax, z[i]);
zMin = Math.min(zMin, z[i]);

if(!filledX && x[i] !== firstX) {
if(!filledX && (+x[i]) !== firstX) {
filledX = true;
gridFill += 'x';
}
if(!filledY && y[i] !== firstY) {
if(!filledY && (+y[i]) !== firstY) {
filledY = true;
gridFill += 'y';
}
if(!filledZ && z[i] !== firstZ) {
if(!filledZ && (+z[i]) !== firstZ) {
filledZ = true;
gridFill += 'z';
}
Expand All @@ -98,13 +106,13 @@ module.exports = function calc(gd, trace) {
if(!filledY) gridFill += 'y';
if(!filledZ) gridFill += 'z';

var Xs = distinctVals(trace.x.slice(0, len));
var Ys = distinctVals(trace.y.slice(0, len));
var Zs = distinctVals(trace.z.slice(0, len));
var Xs = distinctVals(filter(trace.x, len));
var Ys = distinctVals(filter(trace.y, len));
var Zs = distinctVals(filter(trace.z, len));

gridFill = gridFill.replace('x', (x[0] > x[len - 1] ? '-' : '+') + 'x');
gridFill = gridFill.replace('y', (y[0] > y[len - 1] ? '-' : '+') + 'y');
gridFill = gridFill.replace('z', (z[0] > z[len - 1] ? '-' : '+') + 'z');
gridFill = gridFill.replace('x', (firstX > lastX ? '-' : '+') + 'x');
gridFill = gridFill.replace('y', (firstY > lastY ? '-' : '+') + 'y');
gridFill = gridFill.replace('z', (firstZ > lastZ ? '-' : '+') + 'z');

var empty = function() {
len = 0;
Expand All @@ -118,7 +126,7 @@ module.exports = function calc(gd, trace) {

var getArray = function(c) { return c === 'x' ? x : c === 'y' ? y : z; };
var getVals = function(c) { return c === 'x' ? Xs : c === 'y' ? Ys : Zs; };
var getDir = function(c) { return (c[len - 1] < c[0]) ? -1 : 1; };
var getDir = function(c) { return lessThan(c[len - 1], c[0]) ? -1 : 1; };

var arrK = getArray(gridFill[1]);
var arrJ = getArray(gridFill[3]);
Expand Down Expand Up @@ -146,9 +154,9 @@ module.exports = function calc(gd, trace) {
var q100 = getIndex(i + 1, j, k);

if(
!(arrK[q000] * dirK < arrK[q001] * dirK) ||
!(arrJ[q000] * dirJ < arrJ[q010] * dirJ) ||
!(arrI[q000] * dirI < arrI[q100] * dirI)
!lessThan(arrK[q000] * dirK, arrK[q001] * dirK) ||
!lessThan(arrJ[q000] * dirJ, arrJ[q010] * dirJ) ||
!lessThan(arrI[q000] * dirI, arrI[q100] * dirI)
) {
arbitrary = true;
}
Expand Down Expand Up @@ -194,3 +202,17 @@ module.exports = function calc(gd, trace) {
function distinctVals(col) {
return Lib.distinctVals(col).vals;
}

function filter(arr, len) {
if(len === undefined) len = arr.length;

var values = [];
for(var i = 0; i < len; i++) {
values[i] = +arr[i];
}
return values;
}

function lessThan(a, b) {
return +a < +b;
}
6 changes: 3 additions & 3 deletions src/traces/streamtube/convert.js
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Original file line number Diff line number Diff line change
Expand Up @@ -122,9 +122,9 @@ function convert(scene, trace) {
var slen = trace._slen;
if(slen) {
tubeOpts.startingPositions = zip3(
toDataCoords(trace.starts.x.slice(0, slen), 'xaxis'),
toDataCoords(trace.starts.y.slice(0, slen), 'yaxis'),
toDataCoords(trace.starts.z.slice(0, slen), 'zaxis')
toDataCoords(trace._startsX, 'xaxis'),
toDataCoords(trace._startsY, 'yaxis'),
toDataCoords(trace._startsZ, 'zaxis')
);
} else {
// Default starting positions:
Expand Down
122 changes: 77 additions & 45 deletions test/jasmine/tests/streamtube_test.js
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Original file line number Diff line number Diff line change
Expand Up @@ -246,55 +246,87 @@ describe('Test streamtube interactions', function() {
.then(done);
});

it('@gl should work with negative grid steps', function(done) {
var x = [];
var y = [];
var z = [];
var u = [];
var v = [];
var w = [];

for(var i = 0; i < 3; i++) {
for(var j = 0; j < 4; j++) {
for(var k = 0; k < 5; k++) {
x.push(-i);
y.push(-j);
z.push(-k);
u.push(1);
v.push(1);
w.push(1);
[ // list of directions
'number',
'string'
].forEach(function(format) {
[ // list of directions
[-1, -1, -1],
[-1, -1, 1],
[-1, 1, -1],
[1, -1, -1],
[1, 1, -1],
[1, -1, 1],
[-1, 1, 1],
[1, 1, 1]
].forEach(function(dir) {
it('@gl should work with grid steps: ' + dir + ' and values in ' + format + ' format.', function(done) {
var x = [];
var y = [];
var z = [];
var u = [];
var v = [];
var w = [];

for(var i = 0; i < 3; i++) {
for(var j = 0; j < 4; j++) {
for(var k = 0; k < 5; k++) {
var newU = 1;
var newV = 1;
var newW = 1;
var newX = i * dir[0];
var newY = j * dir[1];
var newZ = k * dir[2];

if(format === 'string') {
newU = String(newU);
newV = String(newV);
newW = String(newW);
newX = String(newX);
newY = String(newY);
newZ = String(newZ);
}

u.push(newU);
v.push(newV);
w.push(newW);
x.push(newX);
y.push(newY);
z.push(newZ);
}
}
}
}
}

var fig = {
data: [{
type: 'streamtube',
x: x,
y: y,
z: z,
u: u,
v: v,
w: w
}]
};

function _assert(msg, exp) {
var scene = gd._fullLayout.scene._scene;
var objs = scene.glplot.objects;
expect(objs.length).toBe(1, 'one gl-vis object - ' + msg);
expect(exp.positionsLength).toBe(objs[0].positions.length, 'positions length - ' + msg);
expect(exp.cellsLength).toBe(objs[0].cells.length, 'cells length - ' + msg);
}
var fig = {
data: [{
type: 'streamtube',
x: x,
y: y,
z: z,
u: u,
v: v,
w: w
}]
};

function _assert(msg, exp) {
var scene = gd._fullLayout.scene._scene;
var objs = scene.glplot.objects;
expect(objs.length).toBe(1, 'one gl-vis object - ' + msg);
expect(exp.positionsLength).toBe(objs[0].positions.length, 'positions length - ' + msg);
expect(exp.cellsLength).toBe(objs[0].cells.length, 'cells length - ' + msg);
}

Plotly.plot(gd, fig).then(function() {
_assert('with negative steps', {
positionsLength: 6336,
cellsLength: 2112
Plotly.plot(gd, fig).then(function() {
_assert('lengths', {
positionsLength: 6336,
cellsLength: 2112
});
})
.catch(failTest)
.then(done);
});
})
.catch(failTest)
.then(done);
});
});

it('@gl should return blank mesh grid if encountered arbitrary coordinates', function(done) {
Expand Down