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BUG: Issue with groupby agg with a single function and a a mixed-type frame (GH6337) #6338

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Feb 13, 2014
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1 change: 1 addition & 0 deletions doc/source/release.rst
Original file line number Diff line number Diff line change
Expand Up @@ -91,6 +91,7 @@ Bug Fixes
- ``HDFStore.select_as_multiple`` handles start and stop the same way as ``select`` (:issue:`6177`)
- ``HDFStore.select_as_coordinates`` and ``select_column`` works where clauses that result in filters (:issue:`6177`)
- Regression in join of non_unique_indexes (:issue:`6329`)
- Issue with groupby ``agg`` with a single function and a a mixed-type frame (:issue:`6337`)

pandas 0.13.1
-------------
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9 changes: 9 additions & 0 deletions pandas/core/groupby.py
Original file line number Diff line number Diff line change
Expand Up @@ -2123,6 +2123,7 @@ def _aggregate_item_by_item(self, func, *args, **kwargs):
obj = self._obj_with_exclusions
result = {}
cannot_agg = []
errors=None
for item in obj:
try:
data = obj[item]
Expand All @@ -2133,11 +2134,19 @@ def _aggregate_item_by_item(self, func, *args, **kwargs):
except ValueError:
cannot_agg.append(item)
continue
except TypeError as e:
cannot_agg.append(item)
errors=e
continue

result_columns = obj.columns
if cannot_agg:
result_columns = result_columns.drop(cannot_agg)

# GH6337
if not len(result_columns) and errors is not None:
raise errors

return DataFrame(result, columns=result_columns)

def _decide_output_index(self, output, labels):
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20 changes: 20 additions & 0 deletions pandas/tests/test_groupby.py
Original file line number Diff line number Diff line change
Expand Up @@ -370,6 +370,26 @@ def f(grp):
e.name = None
assert_series_equal(result,e)

def test_agg_api(self):

# GH 6337
# http://stackoverflow.com/questions/21706030/pandas-groupby-agg-function-column-dtype-error
# different api for agg when passed custom function with mixed frame

df = DataFrame({'data1':np.random.randn(5),
'data2':np.random.randn(5),
'key1':['a','a','b','b','a'],
'key2':['one','two','one','two','one']})
grouped = df.groupby('key1')

def peak_to_peak(arr):
return arr.max() - arr.min()

expected = grouped.agg([peak_to_peak])
expected.columns=['data1','data2']
result = grouped.agg(peak_to_peak)
assert_frame_equal(result,expected)

def test_agg_regression1(self):
grouped = self.tsframe.groupby([lambda x: x.year, lambda x: x.month])
result = grouped.agg(np.mean)
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