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BUG/PERF: merge_asof raising TypeError for various "by" column dtypes #55678

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3 changes: 2 additions & 1 deletion doc/source/whatsnew/v2.2.0.rst
Original file line number Diff line number Diff line change
Expand Up @@ -296,7 +296,7 @@ Other Deprecations
Performance improvements
~~~~~~~~~~~~~~~~~~~~~~~~
- Performance improvement in :func:`concat` with ``axis=1`` and objects with unaligned indexes (:issue:`55084`)
- Performance improvement in :func:`merge_asof` when ``by`` contains more than one key (:issue:`55580`)
- Performance improvement in :func:`merge_asof` when ``by`` is not ``None`` (:issue:`55580`, :issue:`55678`)
- Performance improvement in :func:`read_stata` for files with many variables (:issue:`55515`)
- Performance improvement in :func:`to_dict` on converting DataFrame to dictionary (:issue:`50990`)
- Performance improvement in :meth:`DataFrame.groupby` when aggregating pyarrow timestamp and duration dtypes (:issue:`55031`)
Expand Down Expand Up @@ -411,6 +411,7 @@ Groupby/resample/rolling
Reshaping
^^^^^^^^^
- Bug in :func:`concat` ignoring ``sort`` parameter when passed :class:`DatetimeIndex` indexes (:issue:`54769`)
- Bug in :func:`merge_asof` raising ``TypeError`` when ``by`` dtype is not ``object``, ``int64``, or ``uint64`` (:issue:`22794`)
- Bug in :func:`merge` returning columns in incorrect order when left and/or right is empty (:issue:`51929`)
- Bug in :meth:`pandas.DataFrame.melt` where it would not preserve the datetime (:issue:`55254`)
-
Expand Down
12 changes: 6 additions & 6 deletions pandas/_libs/join.pyi
Original file line number Diff line number Diff line change
Expand Up @@ -53,26 +53,26 @@ def outer_join_indexer(
def asof_join_backward_on_X_by_Y(
left_values: np.ndarray, # ndarray[numeric_t]
right_values: np.ndarray, # ndarray[numeric_t]
left_by_values: np.ndarray, # ndarray[by_t]
right_by_values: np.ndarray, # ndarray[by_t]
left_by_values: np.ndarray, # const int64_t[:]
right_by_values: np.ndarray, # const int64_t[:]
allow_exact_matches: bool = ...,
tolerance: np.number | float | None = ...,
use_hashtable: bool = ...,
) -> tuple[npt.NDArray[np.intp], npt.NDArray[np.intp]]: ...
def asof_join_forward_on_X_by_Y(
left_values: np.ndarray, # ndarray[numeric_t]
right_values: np.ndarray, # ndarray[numeric_t]
left_by_values: np.ndarray, # ndarray[by_t]
right_by_values: np.ndarray, # ndarray[by_t]
left_by_values: np.ndarray, # const int64_t[:]
right_by_values: np.ndarray, # const int64_t[:]
allow_exact_matches: bool = ...,
tolerance: np.number | float | None = ...,
use_hashtable: bool = ...,
) -> tuple[npt.NDArray[np.intp], npt.NDArray[np.intp]]: ...
def asof_join_nearest_on_X_by_Y(
left_values: np.ndarray, # ndarray[numeric_t]
right_values: np.ndarray, # ndarray[numeric_t]
left_by_values: np.ndarray, # ndarray[by_t]
right_by_values: np.ndarray, # ndarray[by_t]
left_by_values: np.ndarray, # const int64_t[:]
right_by_values: np.ndarray, # const int64_t[:]
allow_exact_matches: bool = ...,
tolerance: np.number | float | None = ...,
use_hashtable: bool = ...,
Expand Down
45 changes: 11 additions & 34 deletions pandas/_libs/join.pyx
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,6 @@ from numpy cimport (
int64_t,
intp_t,
ndarray,
uint64_t,
)

cnp.import_array()
Expand Down Expand Up @@ -679,23 +678,13 @@ def outer_join_indexer(ndarray[numeric_object_t] left, ndarray[numeric_object_t]
# asof_join_by
# ----------------------------------------------------------------------

from pandas._libs.hashtable cimport (
HashTable,
Int64HashTable,
PyObjectHashTable,
UInt64HashTable,
)

ctypedef fused by_t:
object
int64_t
uint64_t
from pandas._libs.hashtable cimport Int64HashTable


def asof_join_backward_on_X_by_Y(ndarray[numeric_t] left_values,
ndarray[numeric_t] right_values,
ndarray[by_t] left_by_values,
ndarray[by_t] right_by_values,
const int64_t[:] left_by_values,
const int64_t[:] right_by_values,
bint allow_exact_matches=True,
tolerance=None,
bint use_hashtable=True):
Expand All @@ -706,8 +695,7 @@ def asof_join_backward_on_X_by_Y(ndarray[numeric_t] left_values,
bint has_tolerance = False
numeric_t tolerance_ = 0
numeric_t diff = 0
HashTable hash_table
by_t by_value
Int64HashTable hash_table

# if we are using tolerance, set our objects
if tolerance is not None:
Expand All @@ -721,12 +709,7 @@ def asof_join_backward_on_X_by_Y(ndarray[numeric_t] left_values,
right_indexer = np.empty(left_size, dtype=np.intp)

if use_hashtable:
if by_t is object:
hash_table = PyObjectHashTable(right_size)
elif by_t is int64_t:
hash_table = Int64HashTable(right_size)
elif by_t is uint64_t:
hash_table = UInt64HashTable(right_size)
hash_table = Int64HashTable(right_size)

right_pos = 0
for left_pos in range(left_size):
Expand Down Expand Up @@ -771,8 +754,8 @@ def asof_join_backward_on_X_by_Y(ndarray[numeric_t] left_values,

def asof_join_forward_on_X_by_Y(ndarray[numeric_t] left_values,
ndarray[numeric_t] right_values,
ndarray[by_t] left_by_values,
ndarray[by_t] right_by_values,
const int64_t[:] left_by_values,
const int64_t[:] right_by_values,
bint allow_exact_matches=1,
tolerance=None,
bint use_hashtable=True):
Expand All @@ -783,8 +766,7 @@ def asof_join_forward_on_X_by_Y(ndarray[numeric_t] left_values,
bint has_tolerance = False
numeric_t tolerance_ = 0
numeric_t diff = 0
HashTable hash_table
by_t by_value
Int64HashTable hash_table

# if we are using tolerance, set our objects
if tolerance is not None:
Expand All @@ -798,12 +780,7 @@ def asof_join_forward_on_X_by_Y(ndarray[numeric_t] left_values,
right_indexer = np.empty(left_size, dtype=np.intp)

if use_hashtable:
if by_t is object:
hash_table = PyObjectHashTable(right_size)
elif by_t is int64_t:
hash_table = Int64HashTable(right_size)
elif by_t is uint64_t:
hash_table = UInt64HashTable(right_size)
hash_table = Int64HashTable(right_size)

right_pos = right_size - 1
for left_pos in range(left_size - 1, -1, -1):
Expand Down Expand Up @@ -849,8 +826,8 @@ def asof_join_forward_on_X_by_Y(ndarray[numeric_t] left_values,

def asof_join_nearest_on_X_by_Y(ndarray[numeric_t] left_values,
ndarray[numeric_t] right_values,
ndarray[by_t] left_by_values,
ndarray[by_t] right_by_values,
const int64_t[:] left_by_values,
const int64_t[:] right_by_values,
bint allow_exact_matches=True,
tolerance=None,
bint use_hashtable=True):
Expand Down
65 changes: 24 additions & 41 deletions pandas/core/reshape/merge.py
Original file line number Diff line number Diff line change
Expand Up @@ -2153,54 +2153,37 @@ def _get_join_indexers(self) -> tuple[npt.NDArray[np.intp], npt.NDArray[np.intp]
if self.left_by is not None:
# remove 'on' parameter from values if one existed
if self.left_index and self.right_index:
left_by_values = self.left_join_keys
right_by_values = self.right_join_keys
left_join_keys = self.left_join_keys
right_join_keys = self.right_join_keys
else:
left_by_values = self.left_join_keys[0:-1]
right_by_values = self.right_join_keys[0:-1]

# get tuple representation of values if more than one
if len(left_by_values) == 1:
lbv = left_by_values[0]
rbv = right_by_values[0]

# TODO: conversions for EAs that can be no-copy.
lbv = np.asarray(lbv)
rbv = np.asarray(rbv)
if needs_i8_conversion(lbv.dtype):
lbv = lbv.view("i8")
if needs_i8_conversion(rbv.dtype):
rbv = rbv.view("i8")
left_join_keys = self.left_join_keys[0:-1]
right_join_keys = self.right_join_keys[0:-1]

mapped = [
_factorize_keys(
left_join_keys[n],
right_join_keys[n],
sort=False,
how="left",
)
for n in range(len(left_join_keys))
]

if len(left_join_keys) == 1:
left_by_values = mapped[0][0]
right_by_values = mapped[0][1]
else:
# We get here with non-ndarrays in test_merge_by_col_tz_aware
# and test_merge_groupby_multiple_column_with_categorical_column
mapped = [
_factorize_keys(
left_by_values[n],
right_by_values[n],
sort=False,
how="left",
)
for n in range(len(left_by_values))
]
arrs = [np.concatenate(m[:2]) for m in mapped]
shape = tuple(m[2] for m in mapped)
group_index = get_group_index(
arrs, shape=shape, sort=False, xnull=False
)
left_len = len(left_by_values[0])
lbv = group_index[:left_len]
rbv = group_index[left_len:]
# error: Incompatible types in assignment (expression has type
# "Union[ndarray[Any, dtype[Any]], ndarray[Any, dtype[object_]]]",
# variable has type "List[Union[Union[ExtensionArray,
# ndarray[Any, Any]], Index, Series]]")
right_by_values = rbv # type: ignore[assignment]
# error: Incompatible types in assignment (expression has type
# "Union[ndarray[Any, dtype[Any]], ndarray[Any, dtype[object_]]]",
# variable has type "List[Union[Union[ExtensionArray,
# ndarray[Any, Any]], Index, Series]]")
left_by_values = lbv # type: ignore[assignment]
left_len = len(left_join_keys[0])
left_by_values = group_index[:left_len]
right_by_values = group_index[left_len:]

left_by_values = ensure_int64(left_by_values)
right_by_values = ensure_int64(right_by_values)

# choose appropriate function by type
func = _asof_by_function(self.direction)
Expand Down
6 changes: 3 additions & 3 deletions pandas/tests/reshape/merge/test_merge_asof.py
Original file line number Diff line number Diff line change
Expand Up @@ -1345,9 +1345,9 @@ def test_by_mixed_tz_aware(self):
expected["value_y"] = np.array([np.nan], dtype=object)
tm.assert_frame_equal(result, expected)

@pytest.mark.parametrize("dtype", ["m8[ns]", "M8[us]"])
def test_by_datelike(self, dtype):
# GH 55453
@pytest.mark.parametrize("dtype", ["float64", "int16", "m8[ns]", "M8[us]"])
def test_by_dtype(self, dtype):
# GH 55453, GH 22794
left = pd.DataFrame(
{
"by_col": np.array([1], dtype=dtype),
Expand Down