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CI set LD_PRELOAD in circleci job #50941

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Merged
merged 2 commits into from
Jan 23, 2023

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MarcoGorelli
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circle CI job is failing, let's see if this fixes anything

=================================== FAILURES ===================================
______________________________ test_scikit_learn _______________________________
[gw2] linux -- Python 3.8.15 /home/circleci/miniconda3/envs/pandas-dev/bin/python3.8

    def test_scikit_learn():
    
>       sklearn = import_module("sklearn")  # noqa:F841

pandas/tests/test_downstream.py:158: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
pandas/tests/test_downstream.py:27: in import_module
    return importlib.import_module(name)
../miniconda3/envs/pandas-dev/lib/python3.8/importlib/__init__.py:127: in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
<frozen importlib._bootstrap>:1014: in _gcd_import
    ???
<frozen importlib._bootstrap>:991: in _find_and_load
    ???
<frozen importlib._bootstrap>:975: in _find_and_load_unlocked
    ???
<frozen importlib._bootstrap>:671: in _load_unlocked
    ???
<frozen importlib._bootstrap_external>:843: in exec_module
    ???
<frozen importlib._bootstrap>:219: in _call_with_frames_removed
    ???
../miniconda3/envs/pandas-dev/lib/python3.8/site-packages/sklearn/__init__.py:83: in <module>
    from .utils._show_versions import show_versions
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

    """
    Utility methods to print system info for debugging
    
    adapted from :func:`pandas.show_versions`
    """
    # License: BSD 3 clause
    
    import platform
    import sys
    from ..utils.fixes import threadpool_info
    from .. import __version__
    
    
>   from ._openmp_helpers import _openmp_parallelism_enabled
E   ImportError: /home/circleci/miniconda3/envs/pandas-dev/lib/python3.8/site-packages/sklearn/utils/../../../../libgomp.so.1: cannot allocate memory in static TLS block

../miniconda3/envs/pandas-dev/lib/python3.8/site-packages/sklearn/utils/_show_versions.py:14: ImportError

@MarcoGorelli MarcoGorelli marked this pull request as ready for review January 23, 2023 16:11
@MarcoGorelli
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@mroeschke mroeschke added CI Continuous Integration ARM aarch64 architecture labels Jan 23, 2023
@mroeschke mroeschke added this to the 1.5.4 milestone Jan 23, 2023
@mroeschke mroeschke merged commit e7f6a84 into pandas-dev:main Jan 23, 2023
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Thanks @MarcoGorelli

meeseeksmachine pushed a commit to meeseeksmachine/pandas that referenced this pull request Jan 23, 2023
pooja-subramaniam pushed a commit to pooja-subramaniam/pandas that referenced this pull request Jan 25, 2023
* set LD_PRELOAD

* try again

Co-authored-by: MarcoGorelli <>
phofl added a commit that referenced this pull request Jan 28, 2023
#50943)

Backport PR #50941: CI set LD_PRELOAD in circleci job

Co-authored-by: Marco Edward Gorelli <[email protected]>
Co-authored-by: Patrick Hoefler <[email protected]>
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