Pytables: bug fixes, code cleanup, and much updated docs

[jreback]

Should be completely backwards compatible
mainly bug fixes, code clean, and much updated docs
should merge cleanly

1. added str (to do repr)

2. added delitem to support store deletion syntatic sugar

3. row removal in tables is much faster if rows are consecutive
   (remove also returns the number of rows removed if a table)

4. added Term class, refactored Selection (this is backwards compatible)
   Term is a concise way of specifying conditions for queries, e.g.

       Term(dict(field = 'index', op = '>', value = '20121114'))
       Term('index', '20121114')
       Term('index', '>', '20121114')
       Term('index', ['20121114','20121114'])
       Term('index', datetime(2012,11,14))
       Term('index>20121114')
   
       added alias to the Term class; you can specify the nomial indexers
       (e.g. index in DataFrame, major_axis/minor_axis or alias in Panel)
   

   this should close GH PyTables enhancements for selection #1996

5. added Col class to manage the column conversions

6. BUG: added min_itemsize parameter and checks in pytables to allow setting of indexer columns minimum size (current implemenation will truncate indexer columns that are too long in a subsequent append - loss of info)

7. added indexing support via method create_table_index (requires 2.3 in PyTables)
   btw now works quite well as Int64 indicies are used as opposed to the Time64Col which has a bug); includes a check on the pytables version requirement

   this should close GH Add option to create indexes in HDFStore if user is using PyTables Pro / PyTables 2.3+ #698

8. signficantlly updated docs for pytables to reflect all changes; added docs for Table sections

9. BUG: a store would fail if appending but the put had not been done before (see test_append)
   this the result of incompatibility testing on the index_kind

10. BUG: minor change to select and remove: require a table ONLY if where is also provided (and not None)

    all tests pass; tests added for new features

I have some implementation changes to make to Tables to make writing quite a bit faster
but will do in a future commit

[wesm]

Closing this, superceded by v4 (you can just keep pushing to the same PR or rebase on master if you don't want to create new pull requests)

[jreback]

thanks

ready to merge when u r ready

On Nov 27, 2012, at 7:31 PM, Wes McKinney [email protected] wrote:

Closing this, superceded by v4 (you can just keep pushing to the same PR or rebase on master if you don't want to create new pull requests)

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