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Propagate geomapper changes into JHU#297

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krivard merged 76 commits intodeploy-jhucmu-delphi/covidcast-indicators:deploy-jhufrom

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Oct 7, 2020

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Commits on Sep 10, 2020

• diff uploads

  vishakha1812

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• remove return statement

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Commits on Sep 11, 2020

• Merge pull request #276 from cmu-delphi/deploy-jhu

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Commits on Sep 16, 2020

• add code

  

  Jingjing Tang

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• Merge branch 'run-quidel' of https://github.com/cmu-delphi/covidcast-indicators into run-quidel

  

  Jingjing Tang

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  Jingjing Tang

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• update unit tests

  

  Jingjing Tang

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  Jingjing Tang

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• switched to shallow copy

  

  Jingjing Tang

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  Jingjing Tang

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• update documentation

  

  Jingjing Tang

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  Jingjing Tang

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• Add max_borrow_obs

  

  Jingjing Tang

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  Jingjing Tang

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• update documentation

  

  Jingjing Tang

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  Jingjing Tang

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• Copied .github directory from www-covidcast

  nmdefries

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• Removed pull request template and contributing info. Added data quality issue template. Edited existing templates to make more relevant.

  nmdefries

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• Recovered county level & Commented out unreleased signals

  

  Jingjing Tang

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  Jingjing Tang

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• Update params.json.template

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• Update params.json.template

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• Update test_update_sensor.py

  vishakha1812

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• Update the title for DETAILS

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• Mocked S3 for update_sensor

  eujing

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Commits on Sep 17, 2020

• Removed bug_report template. Updated other templates to have more detail

  nmdefries

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• Removed Severity section from data_quality template

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Commits on Sep 18, 2020

• Merge pull request #269 from cmu-delphi/diff_emr

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  krivard

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• Code and documentation for producing geo mapping files

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  krivard

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• Static geo mapping files

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  krivard

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• Updated geo mapping/aggregation utility

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  krivard

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• Merge pull request #277 from cmu-delphi/run-quidel

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• Merge pull request #279 from cmu-delphi/add-issue-templates

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  krivard

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• Remove 8XXXX and 9XXYY, YY > 56 JHU FIPS codes, updated Puerto Rico

  dshemetov

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Commits on Sep 22, 2020

• Code review updates:

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• Update _delphi_utils_python/data_proc/geomap/geo_data_proc.py

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  dshemetov

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  chinandrew

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• Update _delphi_utils_python/delphi_utils/geomap.py

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  dshemetov

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  chinandrew

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• Replace assert with ValueError exception

  dshemetov

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• Add doc string for megacounty code

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• Link todo list to github issues

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• Taking ownership in the README

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Commits on Sep 23, 2020

• Add crosswalk sanity checks to test_geomap

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• Merge branch 'rf_geo_refactor' of https://github.com/cmu-delphi/covidcast-indicators into rf_geo_refactor

  dshemetov

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Commits on Sep 24, 2020

• Uncomment work functions

  dshemetov

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• Code review updates

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  dshemetov

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• String conversion check coverage

  dshemetov

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Commits on Sep 25, 2020

• Two final features

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  dshemetov

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• Part of previous commit

  dshemetov

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• Final set of tests:

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Commits on Sep 28, 2020

• template files

  mariajahja

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• claims based hosp indicator package

  mariajahja

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• unit tests

  mariajahja

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• review, addl doc, pylint, and minor fixes

  mariajahja

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• code review fixes, change signal name

  mariajahja

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Commits on Sep 29, 2020

• Release under MIT license

  krivard

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• Split off contribution guide; add context to README

  krivard

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• Add sections on branches, issues, and project boards

  krivard

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• Add license information

  krivard

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• Moved contribution guide to where github expects it

  krivard

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Commits on Sep 30, 2020

• Update LICENSE with correct copyright date

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  krivard

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  capnrefsmmat

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• Update README.md

  RoniRos

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• Small edits to README

  ryantibs

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• Complete national in todo, add dropna=True/False tests

  dshemetov

  committed
  f06e085

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• Merge pull request #288 from cmu-delphi/dev/public-release

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  krivard

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• Fix too long lines

  dshemetov

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Commits on Oct 1, 2020

• A few comment fixes and additions, minor change of "is" to "=="

  dshemetov

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• Linting fixes for the tests

  dshemetov

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  9a3ffe9

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• Update EMR hosp geomapper with new changes

  dshemetov

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• Emr hosp update that should've been in previous commit

  dshemetov

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• Update the jhu indicator with geomapper changes

  dshemetov

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• smoothed_claims_covid19 -> smoothed_covid19_from_claims

  mariajahja

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• A few minor changes:

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  dshemetov

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• Merge branch 'rf_geo_refactor' of github.com:cmu-delphi/covidcast-indicators into rf_geo_refactor

  dshemetov

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• Remove unneeded numpy import

  dshemetov

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• Small update to README

  dshemetov

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Commits on Oct 2, 2020

• Merge pull request #285 from cmu-delphi/dev-hosp-claims

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  krivard

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Commits on Oct 6, 2020

• Modify national level code support:

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  dshemetov

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• Add archive bypass flag to JHU

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  dshemetov

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• Merge branch 'rf_geo_refactor' of github.com:cmu-delphi/covidcast-indicators into rf_geo_refactor

  dshemetov

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Commits on Oct 7, 2020

• Important fixes to JHU hand additions:

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  dshemetov

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• Add indicator testing notebook and geocoding utility demo notebook

  dshemetov

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• Remove trailing whitespace

  krivard

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• Merge pull request #217 from cmu-delphi/rf_geo_refactor

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