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""" | ||
Convolutional Neural Network | ||
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Objective : To train a CNN model detect if TB is present in Lung X-ray or not. | ||
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Resources CNN Theory : | ||
https://en.wikipedia.org/wiki/Convolutional_neural_network | ||
Resources Tensorflow : https://www.tensorflow.org/tutorials/images/cnn | ||
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Download dataset from : | ||
https://lhncbc.nlm.nih.gov/LHC-publications/pubs/TuberculosisChestXrayImageDataSets.html | ||
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1. Download the dataset folder and create two folder training set and test set | ||
in the parent dataste folder | ||
2. Move 30-40 image from both TB positive and TB Negative folder | ||
in the test set folder | ||
3. The labels of the iamges will be extracted from the folder name | ||
the image is present in. | ||
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""" | ||
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# Part 1 - Building the CNN | ||
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import numpy as np | ||
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# Importing the Keras libraries and packages | ||
import tensorflow as tf | ||
from tensorflow.keras import layers, models | ||
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if __name__ == "__main__": | ||
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# Initialising the CNN | ||
classifier = models.Sequential() | ||
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# Step 1 - Convolution | ||
classifier.add( | ||
layers.Conv2D(32, (3, 3), input_shape=(64, 64, 3), activation="relu") | ||
) | ||
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# Step 2 - Pooling | ||
classifier.add(layers.MaxPooling2D(pool_size=(2, 2))) | ||
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# Adding a second convolutional layer | ||
classifier.add(layers.Conv2D(32, (3, 3), activation="relu")) | ||
classifier.add(layers.MaxPooling2D(pool_size=(2, 2))) | ||
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# Step 3 - Flattening | ||
classifier.add(layers.Flatten()) | ||
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# Step 4 - Full connection | ||
classifier.add(layers.Dense(units=128, activation="relu")) | ||
classifier.add(layers.Dense(units=1, activation="sigmoid")) | ||
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# Compiling the CNN | ||
classifier.compile( | ||
optimizer="adam", loss="binary_crossentropy", metrics=["accuracy"] | ||
) | ||
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# Part 2 - Fitting the CNN to the images | ||
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# Load Trained model weights | ||
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# from keras.models import load_model | ||
# regressor=load_model('cnn.h5') | ||
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train_datagen = tf.keras.preprocessing.image.ImageDataGenerator( | ||
rescale=1.0 / 255, shear_range=0.2, zoom_range=0.2, horizontal_flip=True | ||
) | ||
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test_datagen = tf.keras.preprocessing.image.ImageDataGenerator(rescale=1.0 / 255) | ||
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training_set = train_datagen.flow_from_directory( | ||
"dataset/training_set", target_size=(64, 64), batch_size=32, class_mode="binary" | ||
) | ||
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test_set = test_datagen.flow_from_directory( | ||
"dataset/test_set", target_size=(64, 64), batch_size=32, class_mode="binary" | ||
) | ||
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classifier.fit_generator( | ||
training_set, steps_per_epoch=5, epochs=30, validation_data=test_set | ||
) | ||
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classifier.save("cnn.h5") | ||
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# Part 3 - Making new predictions | ||
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test_image = tf.keras.preprocessing.image.load_img( | ||
"dataset/single_prediction/image.png", target_size=(64, 64) | ||
) | ||
test_image = tf.keras.preprocessing.image.img_to_array(test_image) | ||
test_image = np.expand_dims(test_image, axis=0) | ||
result = classifier.predict(test_image) | ||
training_set.class_indices | ||
if result[0][0] == 0: | ||
prediction = "Normal" | ||
if result[0][0] == 1: | ||
prediction = "Abnormality detected" |
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