Backport PR pandas-dev#35936: (REGR: Fix inplace updates on column to set correct values)

Author: jorisvandenbossche

doc/source/whatsnew/v1.1.2.rst

@@ -15,6 +15,7 @@ including other versions of pandas.
 Fixed regressions
 ~~~~~~~~~~~~~~~~~
 - Regression in :meth:`DatetimeIndex.intersection` incorrectly raising ``AssertionError`` when intersecting against a list (:issue:`35876`)
+- Fix regression in updating a column inplace (e.g. using ``df['col'].fillna(.., inplace=True)``) (:issue:`35731`)
 - Performance regression for :meth:`RangeIndex.format` (:issue:`35712`)
 -
 

pandas/core/internals/managers.py

@@ -1046,6 +1046,7 @@ def iset(self, loc: Union[int, slice, np.ndarray], value):
         Set new item in-place. Does not consolidate. Adds new Block if not
         contained in the current set of items
         """
+        value = extract_array(value, extract_numpy=True)
         # FIXME: refactor, clearly separate broadcasting & zip-like assignment
         #        can prob also fix the various if tests for sparse/categorical
         if self._blklocs is None and self.ndim > 1:

pandas/tests/extension/test_numpy.py

@@ -354,6 +354,12 @@ def test_fillna_frame(self, data_missing):
         # Non-scalar "scalar" values.
         super().test_fillna_frame(data_missing)
 
+    @pytest.mark.skip("Invalid test")
+    def test_fillna_fill_other(self, data):
+        # inplace update doesn't work correctly with patched extension arrays
+        # extract_array returns PandasArray, while dtype is a numpy dtype
+        super().test_fillna_fill_other(data_missing)
+
 
 class TestReshaping(BaseNumPyTests, base.BaseReshapingTests):
     @pytest.mark.skip("Incorrect parent test")

pandas/tests/frame/test_block_internals.py

@@ -626,3 +626,17 @@ def test_add_column_with_pandas_array(self):
         assert type(df["c"]._mgr.blocks[0]) == ObjectBlock
         assert type(df2["c"]._mgr.blocks[0]) == ObjectBlock
         tm.assert_frame_equal(df, df2)
+
+
+def test_update_inplace_sets_valid_block_values():
+    # https://github.com/pandas-dev/pandas/issues/33457
+    df = pd.DataFrame({"a": pd.Series([1, 2, None], dtype="category")})
+
+    # inplace update of a single column
+    df["a"].fillna(1, inplace=True)
+
+    # check we havent put a Series into any block.values
+    assert isinstance(df._mgr.blocks[0].values, pd.Categorical)
+
+    # smoketest for OP bug from GH#35731
+    assert df.isnull().sum().sum() == 0