forked from pandas-dev/pandas
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathbase.py
1206 lines (994 loc) · 39.9 KB
/
base.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
"""An interface for extending pandas with custom arrays.
.. warning::
This is an experimental API and subject to breaking changes
without warning.
"""
import operator
from typing import Any, Callable, Dict, Optional, Sequence, Tuple, Union
import numpy as np
from pandas.compat import set_function_name
from pandas.compat.numpy import function as nv
from pandas.errors import AbstractMethodError
from pandas.util._decorators import Appender, Substitution
from pandas.util._validators import validate_fillna_kwargs
from pandas.core.dtypes.common import is_array_like, is_list_like
from pandas.core.dtypes.dtypes import ExtensionDtype
from pandas.core.dtypes.generic import ABCExtensionArray, ABCIndexClass, ABCSeries
from pandas.core.dtypes.missing import isna
from pandas._typing import ArrayLike
from pandas.core import ops
from pandas.core.algorithms import _factorize_array, unique
from pandas.core.missing import backfill_1d, pad_1d
from pandas.core.sorting import nargsort
_not_implemented_message = "{} does not implement {}."
_extension_array_shared_docs: Dict[str, str] = dict()
def try_cast_to_ea(cls_or_instance, obj, dtype=None):
"""
Call to `_from_sequence` that returns the object unchanged on Exception.
Parameters
----------
cls_or_instance : ExtensionArray subclass or instance
obj : arraylike
Values to pass to cls._from_sequence
dtype : ExtensionDtype, optional
Returns
-------
ExtensionArray or obj
"""
try:
result = cls_or_instance._from_sequence(obj, dtype=dtype)
except Exception:
# We can't predict what downstream EA constructors may raise
result = obj
return result
class ExtensionArray:
"""
Abstract base class for custom 1-D array types.
pandas will recognize instances of this class as proper arrays
with a custom type and will not attempt to coerce them to objects. They
may be stored directly inside a :class:`DataFrame` or :class:`Series`.
.. versionadded:: 0.23.0
Attributes
----------
dtype
nbytes
ndim
shape
Methods
-------
argsort
astype
copy
dropna
factorize
fillna
isna
ravel
repeat
searchsorted
shift
take
unique
view
_concat_same_type
_formatter
_from_factorized
_from_sequence
_from_sequence_of_strings
_ndarray_values
_reduce
_values_for_argsort
_values_for_factorize
Notes
-----
The interface includes the following abstract methods that must be
implemented by subclasses:
* _from_sequence
* _from_factorized
* __getitem__
* __len__
* dtype
* nbytes
* isna
* take
* copy
* _concat_same_type
A default repr displaying the type, (truncated) data, length,
and dtype is provided. It can be customized or replaced by
by overriding:
* __repr__ : A default repr for the ExtensionArray.
* _formatter : Print scalars inside a Series or DataFrame.
Some methods require casting the ExtensionArray to an ndarray of Python
objects with ``self.astype(object)``, which may be expensive. When
performance is a concern, we highly recommend overriding the following
methods:
* fillna
* dropna
* unique
* factorize / _values_for_factorize
* argsort / _values_for_argsort
* searchsorted
The remaining methods implemented on this class should be performant,
as they only compose abstract methods. Still, a more efficient
implementation may be available, and these methods can be overridden.
One can implement methods to handle array reductions.
* _reduce
One can implement methods to handle parsing from strings that will be used
in methods such as ``pandas.io.parsers.read_csv``.
* _from_sequence_of_strings
This class does not inherit from 'abc.ABCMeta' for performance reasons.
Methods and properties required by the interface raise
``pandas.errors.AbstractMethodError`` and no ``register`` method is
provided for registering virtual subclasses.
ExtensionArrays are limited to 1 dimension.
They may be backed by none, one, or many NumPy arrays. For example,
``pandas.Categorical`` is an extension array backed by two arrays,
one for codes and one for categories. An array of IPv6 address may
be backed by a NumPy structured array with two fields, one for the
lower 64 bits and one for the upper 64 bits. Or they may be backed
by some other storage type, like Python lists. Pandas makes no
assumptions on how the data are stored, just that it can be converted
to a NumPy array.
The ExtensionArray interface does not impose any rules on how this data
is stored. However, currently, the backing data cannot be stored in
attributes called ``.values`` or ``._values`` to ensure full compatibility
with pandas internals. But other names as ``.data``, ``._data``,
``._items``, ... can be freely used.
If implementing NumPy's ``__array_ufunc__`` interface, pandas expects
that
1. You defer by returning ``NotImplemented`` when any Series are present
in `inputs`. Pandas will extract the arrays and call the ufunc again.
2. You define a ``_HANDLED_TYPES`` tuple as an attribute on the class.
Pandas inspect this to determine whether the ufunc is valid for the
types present.
See :ref:`extending.extension.ufunc` for more.
"""
# '_typ' is for pandas.core.dtypes.generic.ABCExtensionArray.
# Don't override this.
_typ = "extension"
# ------------------------------------------------------------------------
# Constructors
# ------------------------------------------------------------------------
@classmethod
def _from_sequence(cls, scalars, dtype=None, copy=False):
"""
Construct a new ExtensionArray from a sequence of scalars.
Parameters
----------
scalars : Sequence
Each element will be an instance of the scalar type for this
array, ``cls.dtype.type``.
dtype : dtype, optional
Construct for this particular dtype. This should be a Dtype
compatible with the ExtensionArray.
copy : bool, default False
If True, copy the underlying data.
Returns
-------
ExtensionArray
"""
raise AbstractMethodError(cls)
@classmethod
def _from_sequence_of_strings(cls, strings, dtype=None, copy=False):
"""Construct a new ExtensionArray from a sequence of strings.
.. versionadded:: 0.24.0
Parameters
----------
strings : Sequence
Each element will be an instance of the scalar type for this
array, ``cls.dtype.type``.
dtype : dtype, optional
Construct for this particular dtype. This should be a Dtype
compatible with the ExtensionArray.
copy : bool, default False
If True, copy the underlying data.
Returns
-------
ExtensionArray
"""
raise AbstractMethodError(cls)
@classmethod
def _from_factorized(cls, values, original):
"""
Reconstruct an ExtensionArray after factorization.
Parameters
----------
values : ndarray
An integer ndarray with the factorized values.
original : ExtensionArray
The original ExtensionArray that factorize was called on.
See Also
--------
factorize
ExtensionArray.factorize
"""
raise AbstractMethodError(cls)
# ------------------------------------------------------------------------
# Must be a Sequence
# ------------------------------------------------------------------------
def __getitem__(self, item):
# type (Any) -> Any
"""
Select a subset of self.
Parameters
----------
item : int, slice, or ndarray
* int: The position in 'self' to get.
* slice: A slice object, where 'start', 'stop', and 'step' are
integers or None
* ndarray: A 1-d boolean NumPy ndarray the same length as 'self'
Returns
-------
item : scalar or ExtensionArray
Notes
-----
For scalar ``item``, return a scalar value suitable for the array's
type. This should be an instance of ``self.dtype.type``.
For slice ``key``, return an instance of ``ExtensionArray``, even
if the slice is length 0 or 1.
For a boolean mask, return an instance of ``ExtensionArray``, filtered
to the values where ``item`` is True.
"""
raise AbstractMethodError(self)
def __setitem__(self, key: Union[int, np.ndarray], value: Any) -> None:
"""
Set one or more values inplace.
This method is not required to satisfy the pandas extension array
interface.
Parameters
----------
key : int, ndarray, or slice
When called from, e.g. ``Series.__setitem__``, ``key`` will be
one of
* scalar int
* ndarray of integers.
* boolean ndarray
* slice object
value : ExtensionDtype.type, Sequence[ExtensionDtype.type], or object
value or values to be set of ``key``.
Returns
-------
None
"""
# Some notes to the ExtensionArray implementor who may have ended up
# here. While this method is not required for the interface, if you
# *do* choose to implement __setitem__, then some semantics should be
# observed:
#
# * Setting multiple values : ExtensionArrays should support setting
# multiple values at once, 'key' will be a sequence of integers and
# 'value' will be a same-length sequence.
#
# * Broadcasting : For a sequence 'key' and a scalar 'value',
# each position in 'key' should be set to 'value'.
#
# * Coercion : Most users will expect basic coercion to work. For
# example, a string like '2018-01-01' is coerced to a datetime
# when setting on a datetime64ns array. In general, if the
# __init__ method coerces that value, then so should __setitem__
# Note, also, that Series/DataFrame.where internally use __setitem__
# on a copy of the data.
raise NotImplementedError(
_not_implemented_message.format(type(self), "__setitem__")
)
def __len__(self) -> int:
"""
Length of this array
Returns
-------
length : int
"""
raise AbstractMethodError(self)
def __iter__(self):
"""
Iterate over elements of the array.
"""
# This needs to be implemented so that pandas recognizes extension
# arrays as list-like. The default implementation makes successive
# calls to ``__getitem__``, which may be slower than necessary.
for i in range(len(self)):
yield self[i]
# ------------------------------------------------------------------------
# Required attributes
# ------------------------------------------------------------------------
@property
def dtype(self) -> ExtensionDtype:
"""
An instance of 'ExtensionDtype'.
"""
raise AbstractMethodError(self)
@property
def shape(self) -> Tuple[int, ...]:
"""
Return a tuple of the array dimensions.
"""
return (len(self),)
@property
def ndim(self) -> int:
"""
Extension Arrays are only allowed to be 1-dimensional.
"""
return 1
@property
def nbytes(self) -> int:
"""
The number of bytes needed to store this object in memory.
"""
# If this is expensive to compute, return an approximate lower bound
# on the number of bytes needed.
raise AbstractMethodError(self)
# ------------------------------------------------------------------------
# Additional Methods
# ------------------------------------------------------------------------
def astype(self, dtype, copy=True):
"""
Cast to a NumPy array with 'dtype'.
Parameters
----------
dtype : str or dtype
Typecode or data-type to which the array is cast.
copy : bool, default True
Whether to copy the data, even if not necessary. If False,
a copy is made only if the old dtype does not match the
new dtype.
Returns
-------
array : ndarray
NumPy ndarray with 'dtype' for its dtype.
"""
return np.array(self, dtype=dtype, copy=copy)
def isna(self) -> ArrayLike:
"""
A 1-D array indicating if each value is missing.
Returns
-------
na_values : Union[np.ndarray, ExtensionArray]
In most cases, this should return a NumPy ndarray. For
exceptional cases like ``SparseArray``, where returning
an ndarray would be expensive, an ExtensionArray may be
returned.
Notes
-----
If returning an ExtensionArray, then
* ``na_values._is_boolean`` should be True
* `na_values` should implement :func:`ExtensionArray._reduce`
* ``na_values.any`` and ``na_values.all`` should be implemented
"""
raise AbstractMethodError(self)
def _values_for_argsort(self) -> np.ndarray:
"""
Return values for sorting.
Returns
-------
ndarray
The transformed values should maintain the ordering between values
within the array.
See Also
--------
ExtensionArray.argsort
"""
# Note: this is used in `ExtensionArray.argsort`.
return np.array(self)
def argsort(self, ascending=True, kind="quicksort", *args, **kwargs):
"""
Return the indices that would sort this array.
Parameters
----------
ascending : bool, default True
Whether the indices should result in an ascending
or descending sort.
kind : {'quicksort', 'mergesort', 'heapsort'}, optional
Sorting algorithm.
*args, **kwargs:
passed through to :func:`numpy.argsort`.
Returns
-------
index_array : ndarray
Array of indices that sort ``self``. If NaN values are contained,
NaN values are placed at the end.
See Also
--------
numpy.argsort : Sorting implementation used internally.
"""
# Implementor note: You have two places to override the behavior of
# argsort.
# 1. _values_for_argsort : construct the values passed to np.argsort
# 2. argsort : total control over sorting.
ascending = nv.validate_argsort_with_ascending(ascending, args, kwargs)
result = nargsort(self, kind=kind, ascending=ascending, na_position="last")
return result
def fillna(self, value=None, method=None, limit=None):
"""
Fill NA/NaN values using the specified method.
Parameters
----------
value : scalar, array-like
If a scalar value is passed it is used to fill all missing values.
Alternatively, an array-like 'value' can be given. It's expected
that the array-like have the same length as 'self'.
method : {'backfill', 'bfill', 'pad', 'ffill', None}, default None
Method to use for filling holes in reindexed Series
pad / ffill: propagate last valid observation forward to next valid
backfill / bfill: use NEXT valid observation to fill gap.
limit : int, default None
If method is specified, this is the maximum number of consecutive
NaN values to forward/backward fill. In other words, if there is
a gap with more than this number of consecutive NaNs, it will only
be partially filled. If method is not specified, this is the
maximum number of entries along the entire axis where NaNs will be
filled.
Returns
-------
ExtensionArray
With NA/NaN filled.
"""
value, method = validate_fillna_kwargs(value, method)
mask = self.isna()
if is_array_like(value):
if len(value) != len(self):
raise ValueError(
"Length of 'value' does not match. Got ({}) "
" expected {}".format(len(value), len(self))
)
value = value[mask]
if mask.any():
if method is not None:
func = pad_1d if method == "pad" else backfill_1d
new_values = func(self.astype(object), limit=limit, mask=mask)
new_values = self._from_sequence(new_values, dtype=self.dtype)
else:
# fill with value
new_values = self.copy()
new_values[mask] = value
else:
new_values = self.copy()
return new_values
def dropna(self):
"""
Return ExtensionArray without NA values.
Returns
-------
valid : ExtensionArray
"""
return self[~self.isna()]
def shift(self, periods: int = 1, fill_value: object = None) -> ABCExtensionArray:
"""
Shift values by desired number.
Newly introduced missing values are filled with
``self.dtype.na_value``.
.. versionadded:: 0.24.0
Parameters
----------
periods : int, default 1
The number of periods to shift. Negative values are allowed
for shifting backwards.
fill_value : object, optional
The scalar value to use for newly introduced missing values.
The default is ``self.dtype.na_value``.
.. versionadded:: 0.24.0
Returns
-------
ExtensionArray
Shifted.
Notes
-----
If ``self`` is empty or ``periods`` is 0, a copy of ``self`` is
returned.
If ``periods > len(self)``, then an array of size
len(self) is returned, with all values filled with
``self.dtype.na_value``.
"""
# Note: this implementation assumes that `self.dtype.na_value` can be
# stored in an instance of your ExtensionArray with `self.dtype`.
if not len(self) or periods == 0:
return self.copy()
if isna(fill_value):
fill_value = self.dtype.na_value
empty = self._from_sequence(
[fill_value] * min(abs(periods), len(self)), dtype=self.dtype
)
if periods > 0:
a = empty
b = self[:-periods]
else:
a = self[abs(periods) :]
b = empty
return self._concat_same_type([a, b])
def unique(self):
"""
Compute the ExtensionArray of unique values.
Returns
-------
uniques : ExtensionArray
"""
uniques = unique(self.astype(object))
return self._from_sequence(uniques, dtype=self.dtype)
def searchsorted(self, value, side="left", sorter=None):
"""
Find indices where elements should be inserted to maintain order.
.. versionadded:: 0.24.0
Find the indices into a sorted array `self` (a) such that, if the
corresponding elements in `value` were inserted before the indices,
the order of `self` would be preserved.
Assuming that `self` is sorted:
====== ================================
`side` returned index `i` satisfies
====== ================================
left ``self[i-1] < value <= self[i]``
right ``self[i-1] <= value < self[i]``
====== ================================
Parameters
----------
value : array_like
Values to insert into `self`.
side : {'left', 'right'}, optional
If 'left', the index of the first suitable location found is given.
If 'right', return the last such index. If there is no suitable
index, return either 0 or N (where N is the length of `self`).
sorter : 1-D array_like, optional
Optional array of integer indices that sort array a into ascending
order. They are typically the result of argsort.
Returns
-------
array of ints
Array of insertion points with the same shape as `value`.
See Also
--------
numpy.searchsorted : Similar method from NumPy.
"""
# Note: the base tests provided by pandas only test the basics.
# We do not test
# 1. Values outside the range of the `data_for_sorting` fixture
# 2. Values between the values in the `data_for_sorting` fixture
# 3. Missing values.
arr = self.astype(object)
return arr.searchsorted(value, side=side, sorter=sorter)
def _values_for_factorize(self) -> Tuple[np.ndarray, Any]:
"""
Return an array and missing value suitable for factorization.
Returns
-------
values : ndarray
An array suitable for factorization. This should maintain order
and be a supported dtype (Float64, Int64, UInt64, String, Object).
By default, the extension array is cast to object dtype.
na_value : object
The value in `values` to consider missing. This will be treated
as NA in the factorization routines, so it will be coded as
`na_sentinal` and not included in `uniques`. By default,
``np.nan`` is used.
Notes
-----
The values returned by this method are also used in
:func:`pandas.util.hash_pandas_object`.
"""
return self.astype(object), np.nan
def factorize(self, na_sentinel: int = -1) -> Tuple[np.ndarray, ABCExtensionArray]:
"""
Encode the extension array as an enumerated type.
Parameters
----------
na_sentinel : int, default -1
Value to use in the `codes` array to indicate missing values.
Returns
-------
codes : ndarray
An integer NumPy array that's an indexer into the original
ExtensionArray.
uniques : ExtensionArray
An ExtensionArray containing the unique values of `self`.
.. note::
uniques will *not* contain an entry for the NA value of
the ExtensionArray if there are any missing values present
in `self`.
See Also
--------
factorize : Top-level factorize method that dispatches here.
Notes
-----
:meth:`pandas.factorize` offers a `sort` keyword as well.
"""
# Implementer note: There are two ways to override the behavior of
# pandas.factorize
# 1. _values_for_factorize and _from_factorize.
# Specify the values passed to pandas' internal factorization
# routines, and how to convert from those values back to the
# original ExtensionArray.
# 2. ExtensionArray.factorize.
# Complete control over factorization.
arr, na_value = self._values_for_factorize()
codes, uniques = _factorize_array(
arr, na_sentinel=na_sentinel, na_value=na_value
)
uniques = self._from_factorized(uniques, self)
return codes, uniques
_extension_array_shared_docs[
"repeat"
] = """
Repeat elements of a %(klass)s.
Returns a new %(klass)s where each element of the current %(klass)s
is repeated consecutively a given number of times.
Parameters
----------
repeats : int or array of ints
The number of repetitions for each element. This should be a
non-negative integer. Repeating 0 times will return an empty
%(klass)s.
axis : None
Must be ``None``. Has no effect but is accepted for compatibility
with numpy.
Returns
-------
repeated_array : %(klass)s
Newly created %(klass)s with repeated elements.
See Also
--------
Series.repeat : Equivalent function for Series.
Index.repeat : Equivalent function for Index.
numpy.repeat : Similar method for :class:`numpy.ndarray`.
ExtensionArray.take : Take arbitrary positions.
Examples
--------
>>> cat = pd.Categorical(['a', 'b', 'c'])
>>> cat
[a, b, c]
Categories (3, object): [a, b, c]
>>> cat.repeat(2)
[a, a, b, b, c, c]
Categories (3, object): [a, b, c]
>>> cat.repeat([1, 2, 3])
[a, b, b, c, c, c]
Categories (3, object): [a, b, c]
"""
@Substitution(klass="ExtensionArray")
@Appender(_extension_array_shared_docs["repeat"])
def repeat(self, repeats, axis=None):
nv.validate_repeat(tuple(), dict(axis=axis))
ind = np.arange(len(self)).repeat(repeats)
return self.take(ind)
# ------------------------------------------------------------------------
# Indexing methods
# ------------------------------------------------------------------------
def take(
self, indices: Sequence[int], allow_fill: bool = False, fill_value: Any = None
) -> ABCExtensionArray:
"""
Take elements from an array.
Parameters
----------
indices : sequence of int
Indices to be taken.
allow_fill : bool, default False
How to handle negative values in `indices`.
* False: negative values in `indices` indicate positional indices
from the right (the default). This is similar to
:func:`numpy.take`.
* True: negative values in `indices` indicate
missing values. These values are set to `fill_value`. Any other
other negative values raise a ``ValueError``.
fill_value : any, optional
Fill value to use for NA-indices when `allow_fill` is True.
This may be ``None``, in which case the default NA value for
the type, ``self.dtype.na_value``, is used.
For many ExtensionArrays, there will be two representations of
`fill_value`: a user-facing "boxed" scalar, and a low-level
physical NA value. `fill_value` should be the user-facing version,
and the implementation should handle translating that to the
physical version for processing the take if necessary.
Returns
-------
ExtensionArray
Raises
------
IndexError
When the indices are out of bounds for the array.
ValueError
When `indices` contains negative values other than ``-1``
and `allow_fill` is True.
See Also
--------
numpy.take
api.extensions.take
Notes
-----
ExtensionArray.take is called by ``Series.__getitem__``, ``.loc``,
``iloc``, when `indices` is a sequence of values. Additionally,
it's called by :meth:`Series.reindex`, or any other method
that causes realignment, with a `fill_value`.
Examples
--------
Here's an example implementation, which relies on casting the
extension array to object dtype. This uses the helper method
:func:`pandas.api.extensions.take`.
.. code-block:: python
def take(self, indices, allow_fill=False, fill_value=None):
from pandas.core.algorithms import take
# If the ExtensionArray is backed by an ndarray, then
# just pass that here instead of coercing to object.
data = self.astype(object)
if allow_fill and fill_value is None:
fill_value = self.dtype.na_value
# fill value should always be translated from the scalar
# type for the array, to the physical storage type for
# the data, before passing to take.
result = take(data, indices, fill_value=fill_value,
allow_fill=allow_fill)
return self._from_sequence(result, dtype=self.dtype)
"""
# Implementer note: The `fill_value` parameter should be a user-facing
# value, an instance of self.dtype.type. When passed `fill_value=None`,
# the default of `self.dtype.na_value` should be used.
# This may differ from the physical storage type your ExtensionArray
# uses. In this case, your implementation is responsible for casting
# the user-facing type to the storage type, before using
# pandas.api.extensions.take
raise AbstractMethodError(self)
def copy(self) -> ABCExtensionArray:
"""
Return a copy of the array.
Returns
-------
ExtensionArray
"""
raise AbstractMethodError(self)
def view(self, dtype=None) -> Union[ABCExtensionArray, np.ndarray]:
"""
Return a view on the array.
Parameters
----------
dtype : str, np.dtype, or ExtensionDtype, optional
Default None.
Returns
-------
ExtensionArray
A view of the :class:`ExtensionArray`.
"""
# NB:
# - This must return a *new* object referencing the same data, not self.
# - The only case that *must* be implemented is with dtype=None,
# giving a view with the same dtype as self.
if dtype is not None:
raise NotImplementedError(dtype)
return self[:]
# ------------------------------------------------------------------------
# Printing
# ------------------------------------------------------------------------
def __repr__(self) -> str:
from pandas.io.formats.printing import format_object_summary
template = "{class_name}{data}\nLength: {length}, dtype: {dtype}"
# the short repr has no trailing newline, while the truncated
# repr does. So we include a newline in our template, and strip
# any trailing newlines from format_object_summary
data = format_object_summary(
self, self._formatter(), indent_for_name=False
).rstrip(", \n")
class_name = "<{}>\n".format(self.__class__.__name__)
return template.format(
class_name=class_name, data=data, length=len(self), dtype=self.dtype
)
def _formatter(self, boxed: bool = False) -> Callable[[Any], Optional[str]]:
"""Formatting function for scalar values.
This is used in the default '__repr__'. The returned formatting
function receives instances of your scalar type.
Parameters
----------
boxed : bool, default False
An indicated for whether or not your array is being printed
within a Series, DataFrame, or Index (True), or just by
itself (False). This may be useful if you want scalar values
to appear differently within a Series versus on its own (e.g.
quoted or not).
Returns
-------
Callable[[Any], str]
A callable that gets instances of the scalar type and
returns a string. By default, :func:`repr` is used
when ``boxed=False`` and :func:`str` is used when
``boxed=True``.
"""
if boxed:
return str
return repr
# ------------------------------------------------------------------------
# Reshaping
# ------------------------------------------------------------------------
def ravel(self, order="C") -> ABCExtensionArray:
"""
Return a flattened view on this array.
Parameters
----------
order : {None, 'C', 'F', 'A', 'K'}, default 'C'
Returns
-------
ExtensionArray
Notes
-----
- Because ExtensionArrays are 1D-only, this is a no-op.
- The "order" argument is ignored, is for compatibility with NumPy.
"""
return self
@classmethod
def _concat_same_type(
cls, to_concat: Sequence[ABCExtensionArray]
) -> ABCExtensionArray:
"""
Concatenate multiple array.
Parameters
----------
to_concat : sequence of this type
Returns
-------
ExtensionArray
"""
raise AbstractMethodError(cls)
# The _can_hold_na attribute is set to True so that pandas internals
# will use the ExtensionDtype.na_value as the NA value in operations
# such as take(), reindex(), shift(), etc. In addition, those results