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Disable dims, default_dims, and index_origin options until arviz > v0.11.2
1 parent 78ff887 commit e01a473

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+19
-15
lines changed

1 file changed

+19
-15
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pymc3/backends/arviz.py

Lines changed: 19 additions & 15 deletions
Original file line numberDiff line numberDiff line change
@@ -302,15 +302,15 @@ def posterior_to_xarray(self):
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coords=self.coords,
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dims=self.dims,
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attrs=self.attrs,
305-
index_origin=self.index_origin,
305+
# index_origin=self.index_origin,
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),
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dict_to_dataset(
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data_warmup,
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library=pymc3,
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coords=self.coords,
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dims=self.dims,
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attrs=self.attrs,
313-
index_origin=self.index_origin,
313+
# index_origin=self.index_origin,
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),
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)
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@@ -344,15 +344,15 @@ def sample_stats_to_xarray(self):
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dims=None,
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coords=self.coords,
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attrs=self.attrs,
347-
index_origin=self.index_origin,
347+
# index_origin=self.index_origin,
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),
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dict_to_dataset(
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data_warmup,
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library=pymc3,
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dims=None,
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coords=self.coords,
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attrs=self.attrs,
355-
index_origin=self.index_origin,
355+
# index_origin=self.index_origin,
356356
),
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)
358358

@@ -385,15 +385,15 @@ def log_likelihood_to_xarray(self):
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dims=self.dims,
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coords=self.coords,
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skip_event_dims=True,
388-
index_origin=self.index_origin,
388+
# index_origin=self.index_origin,
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),
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dict_to_dataset(
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data_warmup,
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library=pymc3,
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dims=self.dims,
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coords=self.coords,
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skip_event_dims=True,
396-
index_origin=self.index_origin,
396+
# index_origin=self.index_origin,
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),
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)
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@@ -415,7 +415,11 @@ def translate_posterior_predictive_dict_to_xarray(self, dct) -> xr.Dataset:
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k,
416416
)
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return dict_to_dataset(
418-
data, library=pymc3, coords=self.coords, dims=self.dims, index_origin=self.index_origin
418+
data,
419+
library=pymc3,
420+
coords=self.coords,
421+
# dims=self.dims,
422+
# index_origin=self.index_origin
419423
)
420424

421425
@requires(["posterior_predictive"])
@@ -450,8 +454,8 @@ def priors_to_xarray(self):
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{k: np.expand_dims(self.prior[k], 0) for k in var_names},
451455
library=pymc3,
452456
coords=self.coords,
453-
dims=self.dims,
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index_origin=self.index_origin,
457+
# dims=self.dims,
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# index_origin=self.index_origin,
455459
)
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)
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return priors_dict
@@ -466,9 +470,9 @@ def observed_data_to_xarray(self):
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{**self.observations, **self.multi_observations},
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library=pymc3,
468472
coords=self.coords,
469-
dims=self.dims,
470-
default_dims=[],
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index_origin=self.index_origin,
473+
# dims=self.dims,
474+
# default_dims=[],
475+
# index_origin=self.index_origin,
472476
)
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474478
@requires(["trace", "predictions"])
@@ -513,9 +517,9 @@ def is_data(name, var) -> bool:
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constant_data,
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library=pymc3,
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coords=self.coords,
516-
dims=self.dims,
517-
default_dims=[],
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index_origin=self.index_origin,
520+
# dims=self.dims,
521+
# default_dims=[],
522+
# index_origin=self.index_origin,
519523
)
520524

521525
def to_inference_data(self):

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