Merge branch 'main' into blackjax_memory

Author: junpenglao

.pre-commit-config.yaml

@@ -27,7 +27,7 @@ repos:
         - --exclude=binder/
         - --exclude=versioneer.py
 - repo: https://github.com/astral-sh/ruff-pre-commit
-  rev: v0.5.0
+  rev: v0.5.1
   hooks:
     - id: ruff
       args: ["--fix", "--output-format=full"]

MANIFEST.in

@@ -2,4 +2,3 @@ include requirements.txt
 include *.md *.rst
 include scripts/*.sh
 include LICENSE
-include versioneer.py

conda-envs/environment-dev.yml

@@ -13,7 +13,7 @@ dependencies:
 - numpy>=1.15.0
 - pandas>=0.24.0
 - pip
-- pytensor>=2.23,<2.24
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - networkx
 - scipy>=1.4.1

conda-envs/environment-docs.yml

@@ -11,7 +11,7 @@ dependencies:
 - numpy>=1.15.0
 - pandas>=0.24.0
 - pip
-- pytensor>=2.23,<2.24
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - rich>=13.7.1
 - scipy>=1.4.1

conda-envs/environment-jax.yml

@@ -20,7 +20,7 @@ dependencies:
 - numpyro>=0.8.0
 - pandas>=0.24.0
 - pip
-- pytensor
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - networkx
 - rich>=13.7.1

conda-envs/environment-test.yml

@@ -16,7 +16,7 @@ dependencies:
 - numpy>=1.15.0
 - pandas>=0.24.0
 - pip
-- pytensor>=2.23,<2.24
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - networkx
 - rich>=13.7.1

conda-envs/windows-environment-dev.yml

@@ -13,7 +13,7 @@ dependencies:
 - numpy>=1.15.0
 - pandas>=0.24.0
 - pip
-- pytensor>=2.23,<2.24
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - networkx
 - rich>=13.7.1

conda-envs/windows-environment-test.yml

@@ -16,7 +16,7 @@ dependencies:
 - numpy>=1.15.0
 - pandas>=0.24.0
 - pip
-- pytensor>=2.23,<2.24
+- pytensor>=2.25.1,<2.26
 - python-graphviz
 - networkx
 - rich>=13.7.1