.pre-commit-config.yaml

repos:
- repo: https://github.com/mwouts/jupytext
  rev: v1.13.7
  hooks:
  - id: jupytext
    files: ^examples/.+\.ipynb$
    args: ["--sync"]
- repo: https://github.com/psf/black
  rev: 22.1.0
  hooks:
    - id: black-jupyter
- repo: https://github.com/nbQA-dev/nbQA
  rev: 1.1.0
  hooks:
    - id: nbqa-isort
      additional_dependencies: [isort==5.6.4]
    - id: nbqa-pyupgrade
      additional_dependencies: [pyupgrade==2.7.4]
      args: [--py37-plus]
- repo: https://github.com/MarcoGorelli/madforhooks
  rev: 0.3.0
  hooks:
    - id: check-execution-order
      args: [--strict]
      exclude: |
            (?x)^
            ^examples/ode_models/ODE_with_manual_gradients\.ipynb$
            |examples/samplers/DEMetropolisZ_EfficiencyComparison\.ipynb$
            |examples/gaussian_processes/GP-Latent\.ipynb$
            |examples/gaussian_processes/GP-MaunaLoa2\.ipynb$
            |examples/samplers/MLDA_gravity_surveying\.ipynb$
            |examples/case_studies/putting_workflow\.ipynb$
            |examples/pymc3_howto/sampling_callback\.ipynb$
            |examples/case_studies/blackbox_external_likelihood\.ipynb$
            |examples/samplers/GLM-hierarchical-jax\.ipynb$
            |examples/variational_inference/convolutional_vae_keras_advi\.ipynb$
            |examples/gaussian_processes/GP-TProcess\.ipynb$
            |examples/mixture_models/dependent_density_regression\.ipynb$
            |examples/gaussian_processes/GP-Heteroskedastic\.ipynb$
            |examples/gaussian_processes/GP-MeansAndCovs\.ipynb$
            |examples/samplers/MLDA_variance_reduction_linear_regression\.ipynb$

- repo: https://github.com/FlamingTempura/bibtex-tidy
  rev: v1.8.5
  hooks:
    - id: bibtex-tidy
      files: examples/references.bib
      args: ["--sort=key", --quiet]
      language_version: 15.14.0
- repo: local
  hooks:
    - id: watermark
      args: [--negate, --multiline]
      entry: '%load_ext watermark.*%watermark -n -u -v -iv -w'
      language: pygrep
      minimum_pre_commit_version: 2.8.0
      name: Check notebooks have watermark (see Jupyter style guide from PyMC docs)
      types: [jupyter]
- repo: https://github.com/mwouts/jupytext
  rev: v1.13.7
  hooks:
  - id: jupytext
    files: ^examples/.+\.ipynb$
    args: ["--sync"]