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BUG: 'NoneType' object has no attribute 'to_pydatetime' when using to_sql command with a dataframe with date columns #52178

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romiof opened this issue Mar 24, 2023 · 0 comments · Fixed by #52180
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Arrow pyarrow functionality Bug IO SQL to_sql, read_sql, read_sql_query

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@romiof
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romiof commented Mar 24, 2023

Pandas version checks

  • I have checked that this issue has not already been reported.

  • I have confirmed this bug exists on the latest version of pandas.

  • I have confirmed this bug exists on the main branch of pandas.

Reproducible Example

import pandas as pd
from datetime import datetime

df = pd.DataFrame({"integer": [1, 2, 3], 
                          "date": [
                              (datetime(2022, 1, 1)), 
                              (datetime(2022, 1, 2)), 
                              (None)
                          ], 
                          "float":[4.0, 5.0, 6.0],
                          "strings": ["first", "two", "third"]
                        })

dfarrow = df.convert_dtypes(dtype_backend="pyarrow")

ENGINE_PATH = "sqlite:///mydb.db"

dfarrow.to_sql(name="MyTable_Arrow", con=ENGINE_PATH, if_exists="replace")

Issue Description

Hello! The issue with pyarrow / to_sql / datetime has a new variant.

After #52046 was solved, I got today a new bug:

  • I've installed Pandas from source, using branch 2.0.x and commit 7d5d123
  • Using pyarrow backend
  • If some collumn have dtype datetime and has None value in some line, to_sql crashes with: 'NoneType' object has no attribute 'to_pydatetime'

Traceback

---------------------------------------------------------------------------
AttributeError                            Traceback (most recent call last)
/tmp/ipykernel_3158/3436422928.py in <cell line: 1>()
----> 1 dfarrow.to_sql(name="MyTable_Arrow", con=ENGINE_PATH, if_exists="replace")

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/core/generic.py in to_sql(self, name, con, schema, if_exists, index, index_label, chunksize, dtype, method)
   2868         from pandas.io import sql
   2869 
-> 2870         return sql.to_sql(
   2871             self,
   2872             name,

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/io/sql.py in to_sql(frame, name, con, schema, if_exists, index, index_label, chunksize, dtype, method, engine, **engine_kwargs)
    765 
    766     with pandasSQL_builder(con, schema=schema, need_transaction=True) as pandas_sql:
--> 767         return pandas_sql.to_sql(
    768             frame,
    769             name,

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/io/sql.py in to_sql(self, frame, name, if_exists, index, index_label, schema, chunksize, dtype, method, engine, **engine_kwargs)
   1916         )
   1917 
-> 1918         total_inserted = sql_engine.insert_records(
   1919             table=table,
   1920             con=self.con,

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/io/sql.py in insert_records(self, table, con, frame, name, index, schema, chunksize, method, **engine_kwargs)
   1457 
   1458         try:
-> 1459             return table.insert(chunksize=chunksize, method=method)
   1460         except exc.StatementError as err:
   1461             # GH34431

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/io/sql.py in insert(self, chunksize, method)
    997             raise ValueError(f"Invalid parameter `method`: {method}")
    998 
--> 999         keys, data_list = self.insert_data()
   1000 
   1001         nrows = len(self.frame)

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/io/sql.py in insert_data(self)
    963         for i, (_, ser) in enumerate(temp.items()):
    964             if ser.dtype.kind == "M":
--> 965                 d = ser.dt.to_pydatetime()
    966             elif ser.dtype.kind == "m":
    967                 vals = ser._values

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/core/indexes/accessors.py in to_pydatetime(self)
    211 
    212     def to_pydatetime(self):
--> 213         return cast(ArrowExtensionArray, self._parent.array)._dt_to_pydatetime()
    214 
    215     def isocalendar(self):

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/core/arrays/arrow/array.py in _dt_to_pydatetime(self)
   2078         data = self._data.to_pylist()
   2079         if self._dtype.pyarrow_dtype.unit == "ns":
-> 2080             data = [ts.to_pydatetime(warn=False) for ts in data]
   2081         return np.array(data, dtype=object)
   2082 

~/projects/env/lib/python3.10/site-packages/pandas-2.0.0rc1+13.g7d5d123eba-py3.10-linux-x86_64.egg/pandas/core/arrays/arrow/array.py in <listcomp>(.0)
   2078         data = self._data.to_pylist()
   2079         if self._dtype.pyarrow_dtype.unit == "ns":
-> 2080             data = [ts.to_pydatetime(warn=False) for ts in data]
   2081         return np.array(data, dtype=object)
   2082 

AttributeError: 'NoneType' object has no attribute 'to_pydatetime'

Expected Behavior

I expected it to work, as pyarrow has support 'None values' for strings / int / float (double).

Installed Versions

INSTALLED VERSIONS
------------------
commit           : 7d5d123ebac182ce08b40b8400df726c1d047be7
python           : 3.10.6.final.0
python-bits      : 64
OS               : Linux
OS-release       : 5.10.16.3-microsoft-standard-WSL2
Version          : #1 SMP Fri Apr 2 22:23:49 UTC 2021
machine          : x86_64
processor        : x86_64
byteorder        : little
LC_ALL           : None
LANG             : C.UTF-8
LOCALE           : en_US.UTF-8

pandas           : 2.0.0rc1+13.g7d5d123eba
numpy            : 1.24.1
pytz             : 2022.7
dateutil         : 2.8.2
setuptools       : 67.4.0
pip              : 23.0.1
Cython           : 0.29.33
pytest           : 6.2.5
hypothesis       : None
sphinx           : None
blosc            : None
feather          : None
xlsxwriter       : None
lxml.etree       : None
html5lib         : 1.1
pymysql          : None
psycopg2         : None
jinja2           : 3.1.2
IPython          : 7.34.0
pandas_datareader: None
bs4              : None
bottleneck       : None
brotli           : None
fastparquet      : None
fsspec           : 2022.11.0
gcsfs            : None
matplotlib       : None
numba            : None
numexpr          : None
odfpy            : None
openpyxl         : None
pandas_gbq       : None
pyarrow          : 10.0.1
pyreadstat       : None
pyxlsb           : None
s3fs             : None
scipy            : None
snappy           : None
sqlalchemy       : 2.0.7
tables           : None
tabulate         : None
xarray           : None
xlrd             : None
zstandard        : None
tzdata           : 2023.2
qtpy             : None
pyqt5            : None
@romiof romiof added Bug Needs Triage Issue that has not been reviewed by a pandas team member labels Mar 24, 2023
@phofl phofl added IO SQL to_sql, read_sql, read_sql_query Arrow pyarrow functionality and removed Needs Triage Issue that has not been reviewed by a pandas team member labels Mar 24, 2023
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Labels
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