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jonashaagjonashaag
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Refactor CI
- Drop Azure (move to GHA). - Use mamba-org/provision-with-micromamba to set up Conda envs. - Cache Conda envs. - Use hendrikmuhs/ccache-action to cache C compiliation. - Add Windows 32 bit build. - Drop Ubuntu 32 bit build. - Factor out common GHA code into reusable actions.
1 parent afec0e9 commit 83bd3fa

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-435
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‎ci/setup_env.sh renamed to ‎.circleci/setup_env.sh

File renamed without changes.

‎.github/actions/build-pandas/action.yml

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name: Build pandas
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description: Rebuilds the C extensions and installs pandas
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runs:
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using: composite
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steps:
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- name: Environment Detail
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run: |
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if which micromamba; then
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micromamba info
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micromamba list
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micromamba info | grep -Ei 'environment.+:' | grep -qEiv 'environment.+:.+none'
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fi
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if which pip; then
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pip list
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fi
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python --version
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shell: bash -el {0}
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- name: Get Python version
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id: get-python-version
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run: python3 -c "import platform as p; print(f'::set-output name=version::{p.python_implementation()}-{p.python_version()}')"
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shell: bash -el {0}
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- name: Set up sccache
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uses: ./.github/actions/setup-sccache
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with:
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extra-cache-key: ${{ steps.get-python-version.outputs.version }}
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- name: Build Pandas
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run: |
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which python
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which pip
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time DISTUTILS_C_COMPILER_LAUNCHER=sccache python setup.py build_ext -v -j 2
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pip install -v -e . --no-build-isolation --no-use-pep517 --no-index
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shell: bash -el {0}
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- name: Build Version
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run: pushd /tmp && python -c "import pandas; pandas.show_versions();" && popd
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shell: bash -el {0}

‎.github/actions/build_pandas/action.yml

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This file was deleted.

‎.github/actions/run-tests/action.yml

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name: Run tests and report results
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inputs:
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check-pyarrow-version:
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required: false
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runs:
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using: composite
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steps:
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- name: Check PyArrow version
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run: |
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# Double check that we have the expected PyArrow
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pushd /tmp
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python -c "import pandas; pandas.show_versions()" | egrep -i "pyarrow.+: ${{ matrix.check-pyarrow-version }}"
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popd
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shell: bash -el {0}
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if: ${{ inputs.check-pyarrow-version }}
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- name: Test
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run: ci/run_tests.sh
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shell: bash -el {0}
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- name: Publish test results
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uses: actions/upload-artifact@v2
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with:
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name: Test results
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path: test-data.xml
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if: failure()
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- name: Upload coverage to Codecov
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uses: codecov/codecov-action@v2
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with:
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flags: unittests
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name: codecov-pandas
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fail_ci_if_error: false
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if: failure()

‎.github/actions/setup-python/action.yml

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name: Setup Python and install requirements
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inputs:
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python-version:
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required: true
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architecture:
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default: x64
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runs:
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using: composite
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steps:
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# TODO: GH#44980 https://github.com/pypa/setuptools/issues/2941
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- name: Create temporary requirements.txt
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run: |
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# Drop cache at least once per month
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month_today="$(date '+%Y-%m')"
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cat > requirements.txt <<EOF
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# $month_today
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# Python deps
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pip
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setuptools<60.0.0
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wheel
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# Pandas deps
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# GH 39416
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numpy
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cython
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python-dateutil
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pytz
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# Test deps
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git+https://github.com/nedbat/coveragepy.git
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hypothesis
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pytest>=6.2.5
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pytest-xdist
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pytest-cov
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pytest-asyncio>=0.17
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EOF
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shell: bash -el {0}
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- name: Set up Python
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uses: actions/setup-python@v3
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with:
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python-version: ${{ inputs.python-version }}
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architecture: ${{ inputs.architecture }}
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cache: pip
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- name: Fix $PATH on macOS
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run: |
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# On macOS, the Python version we installed above is too late in $PATH
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# to be effective if using "bash -l" (which we need for code that works
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# with Conda envs).
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cat >> ~/.bash_profile <<EOF
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export PATH="\$(echo "\$PATH" | grep -Eio '[^:]+hostedtoolcache/python[^:]+bin'):\$PATH" \
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EOF
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shell: bash -el {0}
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if: ${{ runner.os == 'macOS' }}
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- name: Install dependencies
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run: |
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cat requirements.txt
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# TODO https://github.com/numpy/numpy/issues/21196
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bits32=$(python -c 'import sys; print(int(sys.maxsize > 2**32))')
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NPY_DISABLE_SVML=$bits32 pip install -r requirements.txt
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pip list
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shell: bash -el {0}

‎.github/actions/setup-sccache/action.yml

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name: Setup sccache
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inputs:
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extra-cache-key:
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required: false
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default: ''
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runs:
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using: composite
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steps:
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- name: Get Date
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id: get-date
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run: echo "::set-output name=today::$(/bin/date -u '+%Y%m%d')"
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shell: bash
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- name: Fix Windows temporary directory
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# On Windows, for some reason the default temporary directory provided to sccache
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# may become read-only at some point. Work around by having a private tempdir.
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id: mktemp
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run: echo "::set-output name=tmpdir::$(mktemp -d)"
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shell: bash
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if: ${{ runner.os == 'Windows' }}
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- name: Setup sccache
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uses: hendrikmuhs/[email protected]
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with:
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variant: sccache
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key: ${{ runner.os }}--${{ runner.arch }}--${{ github.workflow }}--${{ steps.get-date.outputs.today }}--${{ inputs.extra-cache-key }}
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env:
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TMP: "${{ steps.mktemp.outputs.tmpdir }}"

‎.github/actions/setup/action.yml

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name: Set up pandas
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description: Runs all the setup steps required to have a built pandas ready to use
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inputs:
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environment-file:
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default: environment.yml
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pyarrow-version:
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required: false
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is-pypy:
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default: false
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environment-name:
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default: pandas-dev
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python-version:
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required: false
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runs:
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using: composite
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steps:
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- name: Setting conda path
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run: echo "${HOME}/miniconda3/bin" >> $GITHUB_PATH
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shell: bash -l {0}
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- name: Set Arrow version in ${{ inputs.environment-file }} to ${{ inputs.pyarrow-version }}
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run: |
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grep -q ' - pyarrow' ${{ inputs.environment-file }}
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sed -i"" -e "s/ - pyarrow/ - pyarrow=${{ inputs.pyarrow-version }}/" ${{ inputs.environment-file }}
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cat ${{ inputs.environment-file }}
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shell: bash
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if: ${{ inputs.pyarrow-version }}
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- name: Setup environment and build pandas
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run: ci/setup_env.sh
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shell: bash -l {0}
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- name: Pin setuptools (GH#44980)
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run: |
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echo ' - setuptools <60' >> ${{ inputs.environment-file }}
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shell: bash
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- name: Install ${{ inputs.environment-file }} (Python ${{ inputs.python-version }})
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uses: mamba-org/provision-with-micromamba@main
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with:
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environment-name: ${{ inputs.environment-name }}
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environment-file: ${{ inputs.environment-file }}
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extra-specs: |
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${{ inputs.python-version && format('python={0}', inputs.python-version) }}
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cache-env: true
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if: ${{ inputs.is-pypy == 'false' }} # No pypy3.8 support
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- name: Setup PyPy
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uses: actions/setup-python@v3
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with:
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python-version: "pypy-3.8"
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if: ${{ inputs.is-pypy == 'true' }}
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- name: Setup PyPy dependencies
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# TODO: re-enable cov, its slowing the tests down though
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run: pip install Cython numpy python-dateutil pytz pytest>=6.0 pytest-xdist>=1.31.0 hypothesis>=5.5.3 pytest-asyncio>=0.17
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shell: bash
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if: ${{ inputs.is-pypy == 'true' }}

‎.github/workflows/asv-bot.yml

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- created
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env:
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ENV_FILE: environment.yml
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COMMENT: ${{github.event.comment.body}}
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COMMENT: ${{ github.event.comment.body }}
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jobs:
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autotune:
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runs-on: ubuntu-latest
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defaults:
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run:
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shell: bash -l {0}
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shell: bash -el {0}
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concurrency:
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# Set concurrency to prevent abuse(full runs are ~5.5 hours !!!)
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steps:
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- name: Checkout
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uses: actions/checkout@v2
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uses: actions/checkout@v3
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with:
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fetch-depth: 0
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- name: Cache conda
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uses: actions/cache@v2
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with:
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path: ~/conda_pkgs_dir
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key: ${{ runner.os }}-conda-${{ hashFiles('${{ env.ENV_FILE }}') }}
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# Although asv sets up its own env, deps are still needed
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# during discovery process
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- uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: pandas-dev
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channel-priority: strict
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environment-file: ${{ env.ENV_FILE }}
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use-only-tar-bz2: true
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# Although asv sets up its own env, deps are still needed
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# during discovery process
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- name: Set up Conda
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uses: ./.github/actions/setup
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- name: Run benchmarks
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id: bench

‎.github/workflows/autoupdate-pre-commit-config.yml

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runs-on: ubuntu-latest
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steps:
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- name: Set up Python
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uses: actions/setup-python@v2
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uses: actions/setup-python@v3
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- name: Cache multiple paths
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uses: actions/cache@v2
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with:

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