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test_panel4d.py
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# -*- coding: utf-8 -*-
from datetime import datetime
from pandas.compat import range, lrange
import operator
import pytest
from warnings import catch_warnings
import numpy as np
from pandas.core.dtypes.common import is_float_dtype
from pandas.core.dtypes.missing import remove_na_arraylike
from pandas import Series, Index, isnull, notnull
from pandas.core.panel import Panel
from pandas.core.panel4d import Panel4D
from pandas.tseries.offsets import BDay
from pandas.util.testing import (assert_frame_equal, assert_series_equal,
assert_almost_equal)
import pandas.util.testing as tm
def add_nans(panel4d):
for l, label in enumerate(panel4d.labels):
panel = panel4d[label]
tm.add_nans(panel)
class SafeForLongAndSparse(object):
def test_repr(self):
repr(self.panel4d)
def test_iter(self):
tm.equalContents(list(self.panel4d), self.panel4d.labels)
def test_count(self):
f = lambda s: notnull(s).sum()
self._check_stat_op('count', f, obj=self.panel4d, has_skipna=False)
def test_sum(self):
self._check_stat_op('sum', np.sum)
def test_mean(self):
self._check_stat_op('mean', np.mean)
def test_prod(self):
self._check_stat_op('prod', np.prod)
def test_median(self):
def wrapper(x):
if isnull(x).any():
return np.nan
return np.median(x)
self._check_stat_op('median', wrapper)
def test_min(self):
self._check_stat_op('min', np.min)
def test_max(self):
self._check_stat_op('max', np.max)
def test_skew(self):
try:
from scipy.stats import skew
except ImportError:
pytest.skip("no scipy.stats.skew")
def this_skew(x):
if len(x) < 3:
return np.nan
return skew(x, bias=False)
self._check_stat_op('skew', this_skew)
# def test_mad(self):
# f = lambda x: np.abs(x - x.mean()).mean()
# self._check_stat_op('mad', f)
def test_var(self):
def alt(x):
if len(x) < 2:
return np.nan
return np.var(x, ddof=1)
self._check_stat_op('var', alt)
def test_std(self):
def alt(x):
if len(x) < 2:
return np.nan
return np.std(x, ddof=1)
self._check_stat_op('std', alt)
def test_sem(self):
def alt(x):
if len(x) < 2:
return np.nan
return np.std(x, ddof=1) / np.sqrt(len(x))
self._check_stat_op('sem', alt)
# def test_skew(self):
# from scipy.stats import skew
# def alt(x):
# if len(x) < 3:
# return np.nan
# return skew(x, bias=False)
# self._check_stat_op('skew', alt)
def _check_stat_op(self, name, alternative, obj=None, has_skipna=True):
if obj is None:
obj = self.panel4d
# # set some NAs
# obj.loc[5:10] = np.nan
# obj.loc[15:20, -2:] = np.nan
f = getattr(obj, name)
if has_skipna:
def skipna_wrapper(x):
nona = remove_na_arraylike(x)
if len(nona) == 0:
return np.nan
return alternative(nona)
def wrapper(x):
return alternative(np.asarray(x))
with catch_warnings(record=True):
for i in range(obj.ndim):
result = f(axis=i, skipna=False)
expected = obj.apply(wrapper, axis=i)
tm.assert_panel_equal(result, expected)
else:
skipna_wrapper = alternative
wrapper = alternative
with catch_warnings(record=True):
for i in range(obj.ndim):
result = f(axis=i)
if not tm._incompat_bottleneck_version(name):
expected = obj.apply(skipna_wrapper, axis=i)
tm.assert_panel_equal(result, expected)
pytest.raises(Exception, f, axis=obj.ndim)
class SafeForSparse(object):
def test_get_axis(self):
assert self.panel4d._get_axis(0) is self.panel4d.labels
assert self.panel4d._get_axis(1) is self.panel4d.items
assert self.panel4d._get_axis(2) is self.panel4d.major_axis
assert self.panel4d._get_axis(3) is self.panel4d.minor_axis
def test_set_axis(self):
with catch_warnings(record=True):
new_labels = Index(np.arange(len(self.panel4d.labels)))
# TODO: unused?
# new_items = Index(np.arange(len(self.panel4d.items)))
new_major = Index(np.arange(len(self.panel4d.major_axis)))
new_minor = Index(np.arange(len(self.panel4d.minor_axis)))
# ensure propagate to potentially prior-cached items too
# TODO: unused?
# label = self.panel4d['l1']
self.panel4d.labels = new_labels
if hasattr(self.panel4d, '_item_cache'):
assert 'l1' not in self.panel4d._item_cache
assert self.panel4d.labels is new_labels
self.panel4d.major_axis = new_major
assert self.panel4d[0].major_axis is new_major
assert self.panel4d.major_axis is new_major
self.panel4d.minor_axis = new_minor
assert self.panel4d[0].minor_axis is new_minor
assert self.panel4d.minor_axis is new_minor
def test_get_axis_number(self):
assert self.panel4d._get_axis_number('labels') == 0
assert self.panel4d._get_axis_number('items') == 1
assert self.panel4d._get_axis_number('major') == 2
assert self.panel4d._get_axis_number('minor') == 3
def test_get_axis_name(self):
assert self.panel4d._get_axis_name(0) == 'labels'
assert self.panel4d._get_axis_name(1) == 'items'
assert self.panel4d._get_axis_name(2) == 'major_axis'
assert self.panel4d._get_axis_name(3) == 'minor_axis'
def test_arith(self):
with catch_warnings(record=True):
self._test_op(self.panel4d, operator.add)
self._test_op(self.panel4d, operator.sub)
self._test_op(self.panel4d, operator.mul)
self._test_op(self.panel4d, operator.truediv)
self._test_op(self.panel4d, operator.floordiv)
self._test_op(self.panel4d, operator.pow)
self._test_op(self.panel4d, lambda x, y: y + x)
self._test_op(self.panel4d, lambda x, y: y - x)
self._test_op(self.panel4d, lambda x, y: y * x)
self._test_op(self.panel4d, lambda x, y: y / x)
self._test_op(self.panel4d, lambda x, y: y ** x)
pytest.raises(Exception, self.panel4d.__add__,
self.panel4d['l1'])
@staticmethod
def _test_op(panel4d, op):
result = op(panel4d, 1)
tm.assert_panel_equal(result['l1'], op(panel4d['l1'], 1))
def test_keys(self):
tm.equalContents(list(self.panel4d.keys()), self.panel4d.labels)
def test_iteritems(self):
"""Test panel4d.iteritems()"""
assert (len(list(self.panel4d.iteritems())) ==
len(self.panel4d.labels))
def test_combinePanel4d(self):
with catch_warnings(record=True):
result = self.panel4d.add(self.panel4d)
tm.assert_panel4d_equal(result, self.panel4d * 2)
def test_neg(self):
with catch_warnings(record=True):
tm.assert_panel4d_equal(-self.panel4d, self.panel4d * -1)
def test_select(self):
with catch_warnings(record=True):
p = self.panel4d
# select labels
result = p.select(lambda x: x in ('l1', 'l3'), axis='labels')
expected = p.reindex(labels=['l1', 'l3'])
tm.assert_panel4d_equal(result, expected)
# select items
result = p.select(lambda x: x in ('ItemA', 'ItemC'), axis='items')
expected = p.reindex(items=['ItemA', 'ItemC'])
tm.assert_panel4d_equal(result, expected)
# select major_axis
result = p.select(lambda x: x >= datetime(2000, 1, 15),
axis='major')
new_major = p.major_axis[p.major_axis >= datetime(2000, 1, 15)]
expected = p.reindex(major=new_major)
tm.assert_panel4d_equal(result, expected)
# select minor_axis
result = p.select(lambda x: x in ('D', 'A'), axis=3)
expected = p.reindex(minor=['A', 'D'])
tm.assert_panel4d_equal(result, expected)
# corner case, empty thing
result = p.select(lambda x: x in ('foo',), axis='items')
tm.assert_panel4d_equal(result, p.reindex(items=[]))
def test_get_value(self):
for item in self.panel.items:
for mjr in self.panel.major_axis[::2]:
for mnr in self.panel.minor_axis:
result = self.panel.get_value(item, mjr, mnr)
expected = self.panel[item][mnr][mjr]
assert_almost_equal(result, expected)
def test_abs(self):
with catch_warnings(record=True):
result = self.panel4d.abs()
expected = np.abs(self.panel4d)
tm.assert_panel4d_equal(result, expected)
p = self.panel4d['l1']
result = p.abs()
expected = np.abs(p)
tm.assert_panel_equal(result, expected)
df = p['ItemA']
result = df.abs()
expected = np.abs(df)
assert_frame_equal(result, expected)
class CheckIndexing(object):
def test_getitem(self):
pytest.raises(Exception, self.panel4d.__getitem__, 'ItemQ')
def test_delitem_and_pop(self):
with catch_warnings(record=True):
expected = self.panel4d['l2']
result = self.panel4d.pop('l2')
tm.assert_panel_equal(expected, result)
assert 'l2' not in self.panel4d.labels
del self.panel4d['l3']
assert 'l3' not in self.panel4d.labels
pytest.raises(Exception, self.panel4d.__delitem__, 'l3')
values = np.empty((4, 4, 4, 4))
values[0] = 0
values[1] = 1
values[2] = 2
values[3] = 3
panel4d = Panel4D(values, lrange(4), lrange(4),
lrange(4), lrange(4))
# did we delete the right row?
panel4dc = panel4d.copy()
del panel4dc[0]
tm.assert_panel_equal(panel4dc[1], panel4d[1])
tm.assert_panel_equal(panel4dc[2], panel4d[2])
tm.assert_panel_equal(panel4dc[3], panel4d[3])
panel4dc = panel4d.copy()
del panel4dc[1]
tm.assert_panel_equal(panel4dc[0], panel4d[0])
tm.assert_panel_equal(panel4dc[2], panel4d[2])
tm.assert_panel_equal(panel4dc[3], panel4d[3])
panel4dc = panel4d.copy()
del panel4dc[2]
tm.assert_panel_equal(panel4dc[1], panel4d[1])
tm.assert_panel_equal(panel4dc[0], panel4d[0])
tm.assert_panel_equal(panel4dc[3], panel4d[3])
panel4dc = panel4d.copy()
del panel4dc[3]
tm.assert_panel_equal(panel4dc[1], panel4d[1])
tm.assert_panel_equal(panel4dc[2], panel4d[2])
tm.assert_panel_equal(panel4dc[0], panel4d[0])
def test_setitem(self):
with catch_warnings(record=True):
# Panel
p = Panel(dict(
ItemA=self.panel4d['l1']['ItemA'][2:].filter(
items=['A', 'B'])))
self.panel4d['l4'] = p
self.panel4d['l5'] = p
p2 = self.panel4d['l4']
tm.assert_panel_equal(p, p2.reindex(items=p.items,
major_axis=p.major_axis,
minor_axis=p.minor_axis))
# scalar
self.panel4d['lG'] = 1
self.panel4d['lE'] = True
assert self.panel4d['lG'].values.dtype == np.int64
assert self.panel4d['lE'].values.dtype == np.bool_
# object dtype
self.panel4d['lQ'] = 'foo'
assert self.panel4d['lQ'].values.dtype == np.object_
# boolean dtype
self.panel4d['lP'] = self.panel4d['l1'] > 0
assert self.panel4d['lP'].values.dtype == np.bool_
def test_setitem_by_indexer(self):
with catch_warnings(record=True):
# Panel
panel4dc = self.panel4d.copy()
p = panel4dc.iloc[0]
def func():
self.panel4d.iloc[0] = p
pytest.raises(NotImplementedError, func)
# DataFrame
panel4dc = self.panel4d.copy()
df = panel4dc.iloc[0, 0]
df.iloc[:] = 1
panel4dc.iloc[0, 0] = df
assert (panel4dc.iloc[0, 0].values == 1).all()
# Series
panel4dc = self.panel4d.copy()
s = panel4dc.iloc[0, 0, :, 0]
s.iloc[:] = 1
panel4dc.iloc[0, 0, :, 0] = s
assert (panel4dc.iloc[0, 0, :, 0].values == 1).all()
# scalar
panel4dc = self.panel4d.copy()
panel4dc.iloc[0] = 1
panel4dc.iloc[1] = True
panel4dc.iloc[2] = 'foo'
assert (panel4dc.iloc[0].values == 1).all()
assert panel4dc.iloc[1].values.all()
assert (panel4dc.iloc[2].values == 'foo').all()
def test_setitem_by_indexer_mixed_type(self):
with catch_warnings(record=True):
# GH 8702
self.panel4d['foo'] = 'bar'
# scalar
panel4dc = self.panel4d.copy()
panel4dc.iloc[0] = 1
panel4dc.iloc[1] = True
panel4dc.iloc[2] = 'foo'
assert (panel4dc.iloc[0].values == 1).all()
assert panel4dc.iloc[1].values.all()
assert (panel4dc.iloc[2].values == 'foo').all()
def test_comparisons(self):
with catch_warnings(record=True):
p1 = tm.makePanel4D()
p2 = tm.makePanel4D()
tp = p1.reindex(labels=p1.labels.tolist() + ['foo'])
p = p1[p1.labels[0]]
def test_comp(func):
result = func(p1, p2)
tm.assert_numpy_array_equal(result.values,
func(p1.values, p2.values))
# versus non-indexed same objs
pytest.raises(Exception, func, p1, tp)
# versus different objs
pytest.raises(Exception, func, p1, p)
result3 = func(self.panel4d, 0)
tm.assert_numpy_array_equal(result3.values,
func(self.panel4d.values, 0))
with np.errstate(invalid='ignore'):
test_comp(operator.eq)
test_comp(operator.ne)
test_comp(operator.lt)
test_comp(operator.gt)
test_comp(operator.ge)
test_comp(operator.le)
def test_major_xs(self):
ref = self.panel4d['l1']['ItemA']
idx = self.panel4d.major_axis[5]
with catch_warnings(record=True):
xs = self.panel4d.major_xs(idx)
assert_series_equal(xs['l1'].T['ItemA'],
ref.xs(idx), check_names=False)
# not contained
idx = self.panel4d.major_axis[0] - BDay()
pytest.raises(Exception, self.panel4d.major_xs, idx)
def test_major_xs_mixed(self):
self.panel4d['l4'] = 'foo'
with catch_warnings(record=True):
xs = self.panel4d.major_xs(self.panel4d.major_axis[0])
assert xs['l1']['A'].dtype == np.float64
assert xs['l4']['A'].dtype == np.object_
def test_minor_xs(self):
ref = self.panel4d['l1']['ItemA']
with catch_warnings(record=True):
idx = self.panel4d.minor_axis[1]
xs = self.panel4d.minor_xs(idx)
assert_series_equal(xs['l1'].T['ItemA'], ref[idx], check_names=False)
# not contained
pytest.raises(Exception, self.panel4d.minor_xs, 'E')
def test_minor_xs_mixed(self):
self.panel4d['l4'] = 'foo'
with catch_warnings(record=True):
xs = self.panel4d.minor_xs('D')
assert xs['l1'].T['ItemA'].dtype == np.float64
assert xs['l4'].T['ItemA'].dtype == np.object_
def test_xs(self):
l1 = self.panel4d.xs('l1', axis=0)
expected = self.panel4d['l1']
tm.assert_panel_equal(l1, expected)
# View if possible
l1_view = self.panel4d.xs('l1', axis=0)
l1_view.values[:] = np.nan
assert np.isnan(self.panel4d['l1'].values).all()
# Mixed-type
self.panel4d['strings'] = 'foo'
with catch_warnings(record=True):
result = self.panel4d.xs('D', axis=3)
assert result.is_copy is not None
def test_getitem_fancy_labels(self):
with catch_warnings(record=True):
panel4d = self.panel4d
labels = panel4d.labels[[1, 0]]
items = panel4d.items[[1, 0]]
dates = panel4d.major_axis[::2]
cols = ['D', 'C', 'F']
# all 4 specified
tm.assert_panel4d_equal(panel4d.loc[labels, items, dates, cols],
panel4d.reindex(labels=labels, items=items,
major=dates, minor=cols))
# 3 specified
tm.assert_panel4d_equal(panel4d.loc[:, items, dates, cols],
panel4d.reindex(items=items, major=dates,
minor=cols))
# 2 specified
tm.assert_panel4d_equal(panel4d.loc[:, :, dates, cols],
panel4d.reindex(major=dates, minor=cols))
tm.assert_panel4d_equal(panel4d.loc[:, items, :, cols],
panel4d.reindex(items=items, minor=cols))
tm.assert_panel4d_equal(panel4d.loc[:, items, dates, :],
panel4d.reindex(items=items, major=dates))
# only 1
tm.assert_panel4d_equal(panel4d.loc[:, items, :, :],
panel4d.reindex(items=items))
tm.assert_panel4d_equal(panel4d.loc[:, :, dates, :],
panel4d.reindex(major=dates))
tm.assert_panel4d_equal(panel4d.loc[:, :, :, cols],
panel4d.reindex(minor=cols))
def test_getitem_fancy_slice(self):
pass
def test_getitem_fancy_ints(self):
pass
def test_get_value(self):
for label in self.panel4d.labels:
for item in self.panel4d.items:
for mjr in self.panel4d.major_axis[::2]:
for mnr in self.panel4d.minor_axis:
result = self.panel4d.get_value(
label, item, mjr, mnr)
expected = self.panel4d[label][item][mnr][mjr]
assert_almost_equal(result, expected)
def test_set_value(self):
with catch_warnings(record=True):
for label in self.panel4d.labels:
for item in self.panel4d.items:
for mjr in self.panel4d.major_axis[::2]:
for mnr in self.panel4d.minor_axis:
self.panel4d.set_value(label, item, mjr, mnr, 1.)
tm.assert_almost_equal(
self.panel4d[label][item][mnr][mjr], 1.)
res3 = self.panel4d.set_value('l4', 'ItemE', 'foobar', 'baz', 5)
assert is_float_dtype(res3['l4'].values)
# resize
res = self.panel4d.set_value('l4', 'ItemE', 'foo', 'bar', 1.5)
assert isinstance(res, Panel4D)
assert res is not self.panel4d
assert res.get_value('l4', 'ItemE', 'foo', 'bar') == 1.5
res3 = self.panel4d.set_value('l4', 'ItemE', 'foobar', 'baz', 5)
assert is_float_dtype(res3['l4'].values)
class TestPanel4d(CheckIndexing, SafeForSparse,
SafeForLongAndSparse):
def setup_method(self, method):
with catch_warnings(record=True):
self.panel4d = tm.makePanel4D(nper=8)
add_nans(self.panel4d)
def test_constructor(self):
with catch_warnings(record=True):
panel4d = Panel4D(self.panel4d._data)
assert panel4d._data is self.panel4d._data
panel4d = Panel4D(self.panel4d._data, copy=True)
assert panel4d._data is not self.panel4d._data
tm.assert_panel4d_equal(panel4d, self.panel4d)
vals = self.panel4d.values
# no copy
panel4d = Panel4D(vals)
assert panel4d.values is vals
# copy
panel4d = Panel4D(vals, copy=True)
assert panel4d.values is not vals
# GH #8285, test when scalar data is used to construct a Panel4D
# if dtype is not passed, it should be inferred
value_and_dtype = [(1, 'int64'), (3.14, 'float64'),
('foo', np.object_)]
for (val, dtype) in value_and_dtype:
panel4d = Panel4D(val, labels=range(2), items=range(
3), major_axis=range(4), minor_axis=range(5))
vals = np.empty((2, 3, 4, 5), dtype=dtype)
vals.fill(val)
expected = Panel4D(vals, dtype=dtype)
tm.assert_panel4d_equal(panel4d, expected)
# test the case when dtype is passed
panel4d = Panel4D(1, labels=range(2), items=range(
3), major_axis=range(4), minor_axis=range(5), dtype='float32')
vals = np.empty((2, 3, 4, 5), dtype='float32')
vals.fill(1)
expected = Panel4D(vals, dtype='float32')
tm.assert_panel4d_equal(panel4d, expected)
def test_constructor_cast(self):
with catch_warnings(record=True):
zero_filled = self.panel4d.fillna(0)
casted = Panel4D(zero_filled._data, dtype=int)
casted2 = Panel4D(zero_filled.values, dtype=int)
exp_values = zero_filled.values.astype(int)
assert_almost_equal(casted.values, exp_values)
assert_almost_equal(casted2.values, exp_values)
casted = Panel4D(zero_filled._data, dtype=np.int32)
casted2 = Panel4D(zero_filled.values, dtype=np.int32)
exp_values = zero_filled.values.astype(np.int32)
assert_almost_equal(casted.values, exp_values)
assert_almost_equal(casted2.values, exp_values)
# can't cast
data = [[['foo', 'bar', 'baz']]]
pytest.raises(ValueError, Panel, data, dtype=float)
def test_consolidate(self):
with catch_warnings(record=True):
assert self.panel4d._data.is_consolidated()
self.panel4d['foo'] = 1.
assert not self.panel4d._data.is_consolidated()
panel4d = self.panel4d._consolidate()
assert panel4d._data.is_consolidated()
def test_ctor_dict(self):
with catch_warnings(record=True):
l1 = self.panel4d['l1']
l2 = self.panel4d['l2']
d = {'A': l1, 'B': l2.loc[['ItemB'], :, :]}
panel4d = Panel4D(d)
tm.assert_panel_equal(panel4d['A'], self.panel4d['l1'])
tm.assert_frame_equal(panel4d.loc['B', 'ItemB', :, :],
self.panel4d.loc['l2', ['ItemB'],
:, :]['ItemB'])
def test_constructor_dict_mixed(self):
with catch_warnings(record=True):
data = dict((k, v.values) for k, v in self.panel4d.iteritems())
result = Panel4D(data)
exp_major = Index(np.arange(len(self.panel4d.major_axis)))
tm.assert_index_equal(result.major_axis, exp_major)
result = Panel4D(data,
labels=self.panel4d.labels,
items=self.panel4d.items,
major_axis=self.panel4d.major_axis,
minor_axis=self.panel4d.minor_axis)
tm.assert_panel4d_equal(result, self.panel4d)
data['l2'] = self.panel4d['l2']
result = Panel4D(data)
tm.assert_panel4d_equal(result, self.panel4d)
# corner, blow up
data['l2'] = data['l2']['ItemB']
pytest.raises(Exception, Panel4D, data)
data['l2'] = self.panel4d['l2'].values[:, :, :-1]
pytest.raises(Exception, Panel4D, data)
def test_constructor_resize(self):
with catch_warnings(record=True):
data = self.panel4d._data
labels = self.panel4d.labels[:-1]
items = self.panel4d.items[:-1]
major = self.panel4d.major_axis[:-1]
minor = self.panel4d.minor_axis[:-1]
result = Panel4D(data, labels=labels, items=items,
major_axis=major, minor_axis=minor)
expected = self.panel4d.reindex(
labels=labels, items=items, major=major, minor=minor)
tm.assert_panel4d_equal(result, expected)
result = Panel4D(data, items=items, major_axis=major)
expected = self.panel4d.reindex(items=items, major=major)
tm.assert_panel4d_equal(result, expected)
result = Panel4D(data, items=items)
expected = self.panel4d.reindex(items=items)
tm.assert_panel4d_equal(result, expected)
result = Panel4D(data, minor_axis=minor)
expected = self.panel4d.reindex(minor=minor)
tm.assert_panel4d_equal(result, expected)
def test_conform(self):
with catch_warnings(record=True):
p = self.panel4d['l1'].filter(items=['ItemA', 'ItemB'])
conformed = self.panel4d.conform(p)
tm.assert_index_equal(conformed.items, self.panel4d.labels)
tm.assert_index_equal(conformed.major_axis,
self.panel4d.major_axis)
tm.assert_index_equal(conformed.minor_axis,
self.panel4d.minor_axis)
def test_reindex(self):
with catch_warnings(record=True):
ref = self.panel4d['l2']
# labels
result = self.panel4d.reindex(labels=['l1', 'l2'])
tm.assert_panel_equal(result['l2'], ref)
# items
result = self.panel4d.reindex(items=['ItemA', 'ItemB'])
assert_frame_equal(result['l2']['ItemB'], ref['ItemB'])
# major
new_major = list(self.panel4d.major_axis[:10])
result = self.panel4d.reindex(major=new_major)
assert_frame_equal(
result['l2']['ItemB'], ref['ItemB'].reindex(index=new_major))
# raise exception put both major and major_axis
pytest.raises(Exception, self.panel4d.reindex,
major_axis=new_major, major=new_major)
# minor
new_minor = list(self.panel4d.minor_axis[:2])
result = self.panel4d.reindex(minor=new_minor)
assert_frame_equal(
result['l2']['ItemB'], ref['ItemB'].reindex(columns=new_minor))
result = self.panel4d.reindex(labels=self.panel4d.labels,
items=self.panel4d.items,
major=self.panel4d.major_axis,
minor=self.panel4d.minor_axis)
# don't necessarily copy
result = self.panel4d.reindex()
tm.assert_panel4d_equal(result, self.panel4d)
assert result is not self.panel4d
# with filling
smaller_major = self.panel4d.major_axis[::5]
smaller = self.panel4d.reindex(major=smaller_major)
larger = smaller.reindex(major=self.panel4d.major_axis,
method='pad')
tm.assert_panel_equal(larger.loc[:, :,
self.panel4d.major_axis[1], :],
smaller.loc[:, :, smaller_major[0], :])
# don't necessarily copy
result = self.panel4d.reindex(
major=self.panel4d.major_axis, copy=False)
tm.assert_panel4d_equal(result, self.panel4d)
assert result is self.panel4d
def test_not_hashable(self):
with catch_warnings(record=True):
p4D_empty = Panel4D()
pytest.raises(TypeError, hash, p4D_empty)
pytest.raises(TypeError, hash, self.panel4d)
def test_reindex_like(self):
# reindex_like
with catch_warnings(record=True):
smaller = self.panel4d.reindex(labels=self.panel4d.labels[:-1],
items=self.panel4d.items[:-1],
major=self.panel4d.major_axis[:-1],
minor=self.panel4d.minor_axis[:-1])
smaller_like = self.panel4d.reindex_like(smaller)
tm.assert_panel4d_equal(smaller, smaller_like)
def test_sort_index(self):
with catch_warnings(record=True):
import random
rlabels = list(self.panel4d.labels)
ritems = list(self.panel4d.items)
rmajor = list(self.panel4d.major_axis)
rminor = list(self.panel4d.minor_axis)
random.shuffle(rlabels)
random.shuffle(ritems)
random.shuffle(rmajor)
random.shuffle(rminor)
random_order = self.panel4d.reindex(labels=rlabels)
sorted_panel4d = random_order.sort_index(axis=0)
tm.assert_panel4d_equal(sorted_panel4d, self.panel4d)
def test_fillna(self):
with catch_warnings(record=True):
assert not np.isfinite(self.panel4d.values).all()
filled = self.panel4d.fillna(0)
assert np.isfinite(filled.values).all()
pytest.raises(NotImplementedError,
self.panel4d.fillna, method='pad')
def test_swapaxes(self):
with catch_warnings(record=True):
result = self.panel4d.swapaxes('labels', 'items')
assert result.items is self.panel4d.labels
result = self.panel4d.swapaxes('labels', 'minor')
assert result.labels is self.panel4d.minor_axis
result = self.panel4d.swapaxes('items', 'minor')
assert result.items is self.panel4d.minor_axis
result = self.panel4d.swapaxes('items', 'major')
assert result.items is self.panel4d.major_axis
result = self.panel4d.swapaxes('major', 'minor')
assert result.major_axis is self.panel4d.minor_axis
# this should also work
result = self.panel4d.swapaxes(0, 1)
assert result.labels is self.panel4d.items
# this works, but return a copy
result = self.panel4d.swapaxes('items', 'items')
tm.assert_panel4d_equal(self.panel4d, result)
assert id(self.panel4d) != id(result)
def test_update(self):
with catch_warnings(record=True):
p4d = Panel4D([[[[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.]],
[[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.]]]])
other = Panel4D([[[[3.6, 2., np.nan]],
[[np.nan, np.nan, 7]]]])
p4d.update(other)
expected = Panel4D([[[[3.6, 2, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.]],
[[1.5, np.nan, 7],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.],
[1.5, np.nan, 3.]]]])
tm.assert_panel4d_equal(p4d, expected)
def test_dtypes(self):
result = self.panel4d.dtypes
expected = Series(np.dtype('float64'), index=self.panel4d.labels)
assert_series_equal(result, expected)
def test_repr_empty(self):
with catch_warnings(record=True):
empty = Panel4D()
repr(empty)
def test_rename(self):
with catch_warnings(record=True):
mapper = {'l1': 'foo',
'l2': 'bar',
'l3': 'baz'}
renamed = self.panel4d.rename_axis(mapper, axis=0)
exp = Index(['foo', 'bar', 'baz'])
tm.assert_index_equal(renamed.labels, exp)
renamed = self.panel4d.rename_axis(str.lower, axis=3)
exp = Index(['a', 'b', 'c', 'd'])
tm.assert_index_equal(renamed.minor_axis, exp)
# don't copy
renamed_nocopy = self.panel4d.rename_axis(mapper,
axis=0,
copy=False)
renamed_nocopy['foo'] = 3.
assert (self.panel4d['l1'].values == 3).all()
def test_get_attr(self):
tm.assert_panel_equal(self.panel4d['l1'], self.panel4d.l1)
# GH issue 15960
def test_sort_values(self):
pytest.raises(NotImplementedError, self.panel4d.sort_values)
pytest.raises(NotImplementedError, self.panel4d.sort_values, 'ItemA')