forked from pandas-dev/pandas
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathcode_checks.sh
executable file
·296 lines (275 loc) · 15.8 KB
/
code_checks.sh
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
#!/bin/bash
#
# Run checks related to code quality.
#
# This script is intended for both the CI and to check locally that code standards are
# respected. We run doctests here (currently some files only), and we
# validate formatting error in docstrings.
#
# Usage:
# $ ./ci/code_checks.sh # run all checks
# $ ./ci/code_checks.sh code # checks on imported code
# $ ./ci/code_checks.sh doctests # run doctests
# $ ./ci/code_checks.sh docstrings # validate docstring errors
# $ ./ci/code_checks.sh single-docs # check single-page docs build warning-free
# $ ./ci/code_checks.sh notebooks # check execution of documentation notebooks
set -uo pipefail
if [[ -v 1 ]]; then
CHECK=$1
else
# script will fail if it uses an unset variable (i.e. $1 is not provided)
CHECK=""
fi
[[ -z "$CHECK" || "$CHECK" == "code" || "$CHECK" == "doctests" || "$CHECK" == "docstrings" || "$CHECK" == "single-docs" || "$CHECK" == "notebooks" ]] || \
{ echo "Unknown command $1. Usage: $0 [code|doctests|docstrings|single-docs|notebooks]"; exit 1; }
BASE_DIR="$(dirname "$0")/.."
RET=0
### CODE ###
if [[ -z "$CHECK" || "$CHECK" == "code" ]]; then
MSG='Check import. No warnings, and blocklist some optional dependencies' ; echo "$MSG"
python -W error -c "
import sys
import pandas
blocklist = {'bs4', 'gcsfs', 'html5lib', 'http', 'ipython', 'jinja2', 'hypothesis',
'lxml', 'matplotlib', 'openpyxl', 'py', 'pytest', 's3fs', 'scipy',
'tables', 'urllib.request', 'xlrd', 'xlsxwriter'}
# GH#28227 for some of these check for top-level modules, while others are
# more specific (e.g. urllib.request)
import_mods = set(m.split('.')[0] for m in sys.modules) | set(sys.modules)
mods = blocklist & import_mods
if mods:
sys.stderr.write('err: pandas should not import: {}\n'.format(', '.join(mods)))
sys.exit(len(mods))
"
RET=$(($RET + $?)) ; echo "$MSG" "DONE"
fi
### DOCTESTS ###
if [[ -z "$CHECK" || "$CHECK" == "doctests" ]]; then
MSG='Python and Cython Doctests' ; echo "$MSG"
python -c 'import pandas as pd; pd.test(run_doctests=True)'
RET=$(($RET + $?)) ; echo "$MSG" "DONE"
fi
### DOCSTRINGS ###
if [[ -z "$CHECK" || "$CHECK" == "docstrings" ]]; then
MSG='Validate Docstrings' ; echo "$MSG"
"$BASE_DIR"/scripts/validate_docstrings.py \
--format=actions \
-i ES01 `# For now it is ok if docstrings are missing the extended summary` \
-i "pandas.Series.dt PR01" `# Accessors are implemented as classes, but we do not document the Parameters section` \
-i "pandas.Period.freq GL08" \
-i "pandas.Period.ordinal GL08" \
-i "pandas.Timestamp.max PR02" \
-i "pandas.Timestamp.min PR02" \
-i "pandas.Timestamp.resolution PR02" \
-i "pandas.Timestamp.tzinfo GL08" \
-i "pandas.core.groupby.DataFrameGroupBy.plot PR02" \
-i "pandas.core.groupby.SeriesGroupBy.plot PR02" \
-i "pandas.core.resample.Resampler.quantile PR01,PR07" \
-i "pandas.tseries.offsets.BDay PR02,SA01" \
-i "pandas.tseries.offsets.BHalfYearBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.BHalfYearBegin.n GL08" \
-i "pandas.tseries.offsets.BHalfYearBegin.normalize GL08" \
-i "pandas.tseries.offsets.BHalfYearBegin.rule_code GL08" \
-i "pandas.tseries.offsets.BHalfYearBegin.startingMonth GL08" \
-i "pandas.tseries.offsets.BHalfYearEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.BHalfYearEnd.n GL08" \
-i "pandas.tseries.offsets.BHalfYearEnd.normalize GL08" \
-i "pandas.tseries.offsets.BHalfYearEnd.rule_code GL08" \
-i "pandas.tseries.offsets.BHalfYearEnd.startingMonth GL08" \
-i "pandas.tseries.offsets.BQuarterBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.BQuarterBegin.n GL08" \
-i "pandas.tseries.offsets.BQuarterBegin.normalize GL08" \
-i "pandas.tseries.offsets.BQuarterBegin.rule_code GL08" \
-i "pandas.tseries.offsets.BQuarterBegin.startingMonth GL08" \
-i "pandas.tseries.offsets.BQuarterEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.BQuarterEnd.n GL08" \
-i "pandas.tseries.offsets.BQuarterEnd.normalize GL08" \
-i "pandas.tseries.offsets.BQuarterEnd.rule_code GL08" \
-i "pandas.tseries.offsets.BQuarterEnd.startingMonth GL08" \
-i "pandas.tseries.offsets.BYearBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.BYearBegin.month GL08" \
-i "pandas.tseries.offsets.BYearBegin.n GL08" \
-i "pandas.tseries.offsets.BYearBegin.normalize GL08" \
-i "pandas.tseries.offsets.BYearEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.BYearEnd.month GL08" \
-i "pandas.tseries.offsets.BYearEnd.n GL08" \
-i "pandas.tseries.offsets.BYearEnd.normalize GL08" \
-i "pandas.tseries.offsets.BusinessDay PR02,SA01" \
-i "pandas.tseries.offsets.BusinessDay.calendar GL08" \
-i "pandas.tseries.offsets.BusinessDay.holidays GL08" \
-i "pandas.tseries.offsets.BusinessDay.is_on_offset GL08" \
-i "pandas.tseries.offsets.BusinessDay.n GL08" \
-i "pandas.tseries.offsets.BusinessDay.normalize GL08" \
-i "pandas.tseries.offsets.BusinessDay.weekmask GL08" \
-i "pandas.tseries.offsets.BusinessHour PR02,SA01" \
-i "pandas.tseries.offsets.BusinessHour.calendar GL08" \
-i "pandas.tseries.offsets.BusinessHour.end GL08" \
-i "pandas.tseries.offsets.BusinessHour.holidays GL08" \
-i "pandas.tseries.offsets.BusinessHour.is_on_offset GL08" \
-i "pandas.tseries.offsets.BusinessHour.n GL08" \
-i "pandas.tseries.offsets.BusinessHour.normalize GL08" \
-i "pandas.tseries.offsets.BusinessHour.start GL08" \
-i "pandas.tseries.offsets.BusinessHour.weekmask GL08" \
-i "pandas.tseries.offsets.BusinessMonthBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.BusinessMonthBegin.n GL08" \
-i "pandas.tseries.offsets.BusinessMonthBegin.normalize GL08" \
-i "pandas.tseries.offsets.BusinessMonthEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.BusinessMonthEnd.n GL08" \
-i "pandas.tseries.offsets.BusinessMonthEnd.normalize GL08" \
-i "pandas.tseries.offsets.CBMonthBegin PR02" \
-i "pandas.tseries.offsets.CBMonthEnd PR02" \
-i "pandas.tseries.offsets.CDay PR02,SA01" \
-i "pandas.tseries.offsets.CustomBusinessDay PR02,SA01" \
-i "pandas.tseries.offsets.CustomBusinessDay.calendar GL08" \
-i "pandas.tseries.offsets.CustomBusinessDay.holidays GL08" \
-i "pandas.tseries.offsets.CustomBusinessDay.is_on_offset GL08" \
-i "pandas.tseries.offsets.CustomBusinessDay.n GL08" \
-i "pandas.tseries.offsets.CustomBusinessDay.normalize GL08" \
-i "pandas.tseries.offsets.CustomBusinessDay.weekmask GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour PR02,SA01" \
-i "pandas.tseries.offsets.CustomBusinessHour.calendar GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.end GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.holidays GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.is_on_offset GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.n GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.normalize GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.start GL08" \
-i "pandas.tseries.offsets.CustomBusinessHour.weekmask GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin PR02" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.calendar GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.holidays GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.m_offset GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.n GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.normalize GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthBegin.weekmask GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd PR02" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.calendar GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.holidays GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.m_offset GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.n GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.normalize GL08" \
-i "pandas.tseries.offsets.CustomBusinessMonthEnd.weekmask GL08" \
-i "pandas.tseries.offsets.DateOffset.is_on_offset GL08" \
-i "pandas.tseries.offsets.DateOffset.n GL08" \
-i "pandas.tseries.offsets.DateOffset.normalize GL08" \
-i "pandas.tseries.offsets.Day.is_on_offset GL08" \
-i "pandas.tseries.offsets.Day.n GL08" \
-i "pandas.tseries.offsets.Day.normalize GL08" \
-i "pandas.tseries.offsets.Easter.is_on_offset GL08" \
-i "pandas.tseries.offsets.Easter.n GL08" \
-i "pandas.tseries.offsets.Easter.normalize GL08" \
-i "pandas.tseries.offsets.FY5253.get_rule_code_suffix GL08" \
-i "pandas.tseries.offsets.FY5253.get_year_end GL08" \
-i "pandas.tseries.offsets.FY5253.is_on_offset GL08" \
-i "pandas.tseries.offsets.FY5253.n GL08" \
-i "pandas.tseries.offsets.FY5253.normalize GL08" \
-i "pandas.tseries.offsets.FY5253.rule_code GL08" \
-i "pandas.tseries.offsets.FY5253.startingMonth GL08" \
-i "pandas.tseries.offsets.FY5253.variation GL08" \
-i "pandas.tseries.offsets.FY5253.weekday GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.get_rule_code_suffix GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.get_weeks GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.is_on_offset GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.n GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.normalize GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.qtr_with_extra_week GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.rule_code GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.startingMonth GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.variation GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.weekday GL08" \
-i "pandas.tseries.offsets.FY5253Quarter.year_has_extra_week GL08" \
-i "pandas.tseries.offsets.HalfYearBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.HalfYearBegin.n GL08" \
-i "pandas.tseries.offsets.HalfYearBegin.normalize GL08" \
-i "pandas.tseries.offsets.HalfYearBegin.rule_code GL08" \
-i "pandas.tseries.offsets.HalfYearBegin.startingMonth GL08" \
-i "pandas.tseries.offsets.HalfYearEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.HalfYearEnd.n GL08" \
-i "pandas.tseries.offsets.HalfYearEnd.normalize GL08" \
-i "pandas.tseries.offsets.HalfYearEnd.rule_code GL08" \
-i "pandas.tseries.offsets.HalfYearEnd.startingMonth GL08" \
-i "pandas.tseries.offsets.Hour.is_on_offset GL08" \
-i "pandas.tseries.offsets.Hour.n GL08" \
-i "pandas.tseries.offsets.Hour.normalize GL08" \
-i "pandas.tseries.offsets.LastWeekOfMonth.is_on_offset GL08" \
-i "pandas.tseries.offsets.LastWeekOfMonth.n GL08" \
-i "pandas.tseries.offsets.LastWeekOfMonth.normalize GL08" \
-i "pandas.tseries.offsets.LastWeekOfMonth.week GL08" \
-i "pandas.tseries.offsets.LastWeekOfMonth.weekday GL08" \
-i "pandas.tseries.offsets.Micro.is_on_offset GL08" \
-i "pandas.tseries.offsets.Micro.n GL08" \
-i "pandas.tseries.offsets.Micro.normalize GL08" \
-i "pandas.tseries.offsets.Milli.is_on_offset GL08" \
-i "pandas.tseries.offsets.Milli.n GL08" \
-i "pandas.tseries.offsets.Milli.normalize GL08" \
-i "pandas.tseries.offsets.Minute.is_on_offset GL08" \
-i "pandas.tseries.offsets.Minute.n GL08" \
-i "pandas.tseries.offsets.Minute.normalize GL08" \
-i "pandas.tseries.offsets.MonthBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.MonthBegin.n GL08" \
-i "pandas.tseries.offsets.MonthBegin.normalize GL08" \
-i "pandas.tseries.offsets.MonthEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.MonthEnd.n GL08" \
-i "pandas.tseries.offsets.MonthEnd.normalize GL08" \
-i "pandas.tseries.offsets.Nano.is_on_offset GL08" \
-i "pandas.tseries.offsets.Nano.normalize GL08" \
-i "pandas.tseries.offsets.Nano.n GL08" \
-i "pandas.tseries.offsets.QuarterBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.QuarterBegin.n GL08" \
-i "pandas.tseries.offsets.QuarterBegin.normalize GL08" \
-i "pandas.tseries.offsets.QuarterBegin.rule_code GL08" \
-i "pandas.tseries.offsets.QuarterBegin.startingMonth GL08" \
-i "pandas.tseries.offsets.QuarterEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.QuarterEnd.n GL08" \
-i "pandas.tseries.offsets.QuarterEnd.normalize GL08" \
-i "pandas.tseries.offsets.QuarterEnd.rule_code GL08" \
-i "pandas.tseries.offsets.QuarterEnd.startingMonth GL08" \
-i "pandas.tseries.offsets.Second.is_on_offset GL08" \
-i "pandas.tseries.offsets.Second.n GL08" \
-i "pandas.tseries.offsets.Second.normalize GL08" \
-i "pandas.tseries.offsets.SemiMonthBegin.day_of_month GL08" \
-i "pandas.tseries.offsets.SemiMonthBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.SemiMonthBegin.n GL08" \
-i "pandas.tseries.offsets.SemiMonthBegin.normalize GL08" \
-i "pandas.tseries.offsets.SemiMonthBegin.rule_code GL08" \
-i "pandas.tseries.offsets.SemiMonthEnd.day_of_month GL08" \
-i "pandas.tseries.offsets.SemiMonthEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.SemiMonthEnd.n GL08" \
-i "pandas.tseries.offsets.SemiMonthEnd.normalize GL08" \
-i "pandas.tseries.offsets.SemiMonthEnd.rule_code GL08" \
-i "pandas.tseries.offsets.Tick GL08" \
-i "pandas.tseries.offsets.Tick.is_on_offset GL08" \
-i "pandas.tseries.offsets.Tick.n GL08" \
-i "pandas.tseries.offsets.Tick.normalize GL08" \
-i "pandas.tseries.offsets.Week.is_on_offset GL08" \
-i "pandas.tseries.offsets.Week.n GL08" \
-i "pandas.tseries.offsets.Week.normalize GL08" \
-i "pandas.tseries.offsets.Week.weekday GL08" \
-i "pandas.tseries.offsets.WeekOfMonth.is_on_offset GL08" \
-i "pandas.tseries.offsets.WeekOfMonth.n GL08" \
-i "pandas.tseries.offsets.WeekOfMonth.normalize GL08" \
-i "pandas.tseries.offsets.WeekOfMonth.week GL08" \
-i "pandas.tseries.offsets.WeekOfMonth.weekday GL08" \
-i "pandas.tseries.offsets.YearBegin.is_on_offset GL08" \
-i "pandas.tseries.offsets.YearBegin.month GL08" \
-i "pandas.tseries.offsets.YearBegin.n GL08" \
-i "pandas.tseries.offsets.YearBegin.normalize GL08" \
-i "pandas.tseries.offsets.YearEnd.is_on_offset GL08" \
-i "pandas.tseries.offsets.YearEnd.month GL08" \
-i "pandas.tseries.offsets.YearEnd.n GL08" \
-i "pandas.tseries.offsets.YearEnd.normalize GL08" \
-i "pandas.util.hash_pandas_object PR07,SA01" # There should be no backslash in the final line, please keep this comment in the last ignored function
RET=$(($RET + $?)) ; echo $MSG "DONE"
fi
### DOCUMENTATION NOTEBOOKS ###
if [[ -z "$CHECK" || "$CHECK" == "notebooks" ]]; then
MSG='Notebooks' ; echo $MSG
jupyter nbconvert --execute "$(find doc/source -name '*.ipynb')" --to notebook
RET=$(($RET + $?)) ; echo $MSG "DONE"
fi
### SINGLE-PAGE DOCS ###
if [[ -z "$CHECK" || "$CHECK" == "single-docs" ]]; then
python doc/make.py --warnings-are-errors --no-browser --single pandas.Series.value_counts
python doc/make.py --warnings-are-errors --no-browser --single pandas.Series.str.split
fi
exit $RET