From a4abd68cf47c9f4cd2f138bafc5fcd66e3e86f61 Mon Sep 17 00:00:00 2001
From: "Logan C. Brooks" <lcbrooks@andrew.cmu.edu>
Date: Mon, 27 Feb 2023 14:11:53 -0800
Subject: [PATCH] Update GitHub Actions themselves, not just embedded
 dependencies

```{r}
usethis::use_github_action("pkgdown")
usethis::use_github_action_check_release() # and follow instructions regarding badge
```
---
 .github/workflows/R-CMD-check.yaml |  6 +++---
 .github/workflows/pkgdown.yaml     | 27 +++++++++++++++++++--------
 README.md                          |  2 +-
 3 files changed, 23 insertions(+), 12 deletions(-)

diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
index ec397ab8..f4b17a4b 100644
--- a/.github/workflows/R-CMD-check.yaml
+++ b/.github/workflows/R-CMD-check.yaml
@@ -1,4 +1,4 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
@@ -15,12 +15,12 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
       R_KEEP_PKG_SOURCE: yes
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - uses: r-lib/actions/setup-r@v2
         with:
           use-public-rspm: true
-      
+
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
           extra-packages: any::rcmdcheck
diff --git a/.github/workflows/pkgdown.yaml b/.github/workflows/pkgdown.yaml
index 086d08c1..087f0b05 100644
--- a/.github/workflows/pkgdown.yaml
+++ b/.github/workflows/pkgdown.yaml
@@ -1,8 +1,10 @@
-# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
+# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
 # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 on:
   push:
     branches: [main, master]
+  pull_request:
+    branches: [main, master]
   release:
     types: [published]
   workflow_dispatch:
@@ -12,10 +14,13 @@ name: pkgdown
 jobs:
   pkgdown:
     runs-on: ubuntu-latest
+    # Only restrict concurrency for non-PR jobs
+    concurrency:
+      group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
 
       - uses: r-lib/actions/setup-pandoc@v2
 
@@ -25,11 +30,17 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
-          extra-packages: pkgdown
+          extra-packages: any::pkgdown, local::.
           needs: website
 
-      - name: Deploy package
-        run: |
-          git config --local user.name "$GITHUB_ACTOR"
-          git config --local user.email "$GITHUB_ACTOR@users.noreply.github.com"
-          Rscript -e 'pkgdown::deploy_to_branch(new_process = FALSE)'
+      - name: Build site
+        run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
+        shell: Rscript {0}
+
+      - name: Deploy to GitHub pages 🚀
+        if: github.event_name != 'pull_request'
+        uses: JamesIves/github-pages-deploy-action@v4.4.1
+        with:
+          clean: false
+          branch: gh-pages
+          folder: docs
diff --git a/README.md b/README.md
index 434d2a25..5857325a 100644
--- a/README.md
+++ b/README.md
@@ -1,7 +1,7 @@
 # epiprocess
  
  <!-- badges: start -->
-  [![R-CMD-check](https://github.com/cmu-delphi/epiprocess/workflows/R-CMD-check/badge.svg)](https://github.com/cmu-delphi/epiprocess/actions)
+  [![R-CMD-check](https://github.com/cmu-delphi/epiprocess/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/cmu-delphi/epiprocess/actions/workflows/R-CMD-check.yaml)
   <!-- badges: end -->
 
 This package introduces a common data structure for epidemiological data sets