pass checks and redocument

Author: dajmcdon

NAMESPACE

@@ -192,8 +192,10 @@ export(mutate)
 export(nested_quantiles)
 export(new_default_epi_recipe_blueprint)
 export(new_epi_recipe_blueprint)
+export(pivot_longer)
 export(pivot_quantiles_longer)
 export(pivot_quantiles_wider)
+export(pivot_wider)
 export(prep)
 export(quantile_reg)
 export(rand_id)
@@ -328,6 +330,8 @@ importFrom(tidyr,crossing)
 importFrom(tidyr,drop_na)
 importFrom(tidyr,expand_grid)
 importFrom(tidyr,fill)
+importFrom(tidyr,pivot_longer)
+importFrom(tidyr,pivot_wider)
 importFrom(tidyr,unnest)
 importFrom(tidyselect,all_of)
 importFrom(utils,capture.output)

R/epi_recipe.R

@@ -52,7 +52,7 @@ epi_recipe <- function(x, ...) {
 #'   step_epi_lag(death_rate, lag = c(0, 7, 14)) %>%
 #'   step_epi_ahead(death_rate, ahead = 7) %>%
 #'   step_epi_lag(case_rate, lag = c(0, 7, 14)) %>%
-#'   step_epi_naomit(all_predictors())
+#'   step_epi_naomit()
 #'
 #' r
 epi_recipe.epi_df <- function(x,

R/flusight_hub_formatter.R

@@ -55,6 +55,7 @@ abbr_to_location <- function(abbr) {
 #'
 #' @examples
 #' library(dplyr)
+#' library(epiprocess)
 #' weekly_deaths <- covid_case_death_rates %>%
 #'   filter(
 #'     time_value >= as.Date("2021-09-01"),

R/make_smooth_quantile_reg.R

@@ -35,7 +35,6 @@
 #' qr_spec <- smooth_quantile_reg(quantile_levels = c(.2, .5, .8), outcome_locations = 20:1)
 #' tt <- qr_spec %>% fit_xy(x = XY[, 21:41], y = XY[, 1:20])
 #'
-#' library(dplyr)
 #' pl <- predict(
 #'   object = tt,
 #'   new_data = XY[max(which(complete.cases(XY[, 21:41]))), 21:41]

R/reexports.R

@@ -54,6 +54,14 @@ tibble::as_tibble
 #' @export
 tibble::tibble
 
+#' @importFrom tidyr pivot_longer
+#' @export
+tidyr::pivot_longer
+
+#' @importFrom tidyr pivot_wider
+#' @export
+tidyr::pivot_wider
+
 #' @importFrom tidyr unnest
 #' @export
 tidyr::unnest