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Merge pull request #443 from cmu-delphi/makefile
Add Makefiles with convenience functions to each indicator
2 parents 0e089b7 + bebf07e commit 25c61c3

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‎_delphi_utils_python/Makefile

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.PHONY = venv, lint, test, clean
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dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
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5+
venv:
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python3.8 -m venv env
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8+
install: venv
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. env/bin/activate; \
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pip install wheel ; \
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pip install -e .
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13+
lint:
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. env/bin/activate; \
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pylint $(dir)
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17+
test:
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. env/bin/activate ;\
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(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
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clean:
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rm -rf env
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rm -f params.json

‎_template_python/Makefile

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.PHONY = venv, lint, test, clean
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dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
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5+
venv:
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python3.8 -m venv env
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8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
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. env/bin/activate ;\
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(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
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22+
clean:
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rm -rf env
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rm -f params.json

‎cdc_covidnet/Makefile

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.PHONY = venv, lint, test, clean
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dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
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22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎changehc/Makefile

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.PHONY = venv, lint, test, clean
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dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
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22+
clean:
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rm -rf env
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rm -f params.json

‎claims_hosp/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎combo_cases_and_deaths/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎google_health/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎google_symptoms/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎jhu/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎nchs_mortality/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎quidel/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎quidel_covidtest/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎safegraph/Makefile

Lines changed: 24 additions & 0 deletions
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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎safegraph_patterns/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

‎usafacts/Makefile

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.PHONY = venv, lint, test, clean
2+
3+
dir = $(shell find ./delphi_* -name __init__.py | grep -o 'delphi_[_[:alnum:]]*')
4+
5+
venv:
6+
python3.8 -m venv env
7+
8+
install: venv
9+
. env/bin/activate; \
10+
pip install wheel ; \
11+
pip install -e ../_delphi_utils_python ;\
12+
pip install -e .
13+
14+
lint:
15+
. env/bin/activate; \
16+
pylint $(dir)
17+
18+
test:
19+
. env/bin/activate ;\
20+
(cd tests && ../env/bin/pytest --cov=$(dir) --cov-report=term-missing)
21+
22+
clean:
23+
rm -rf env
24+
rm -f params.json

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