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latest.Dockerfile
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ARG BASE_IMAGE=debian
ARG BASE_IMAGE_TAG=12
ARG BUILD_ON_IMAGE=glcr.b-data.ch/python/ver
ARG PYTHON_VERSION
ARG CUDA_IMAGE_FLAVOR
ARG NB_USER=jovyan
ARG NB_UID=1000
ARG JUPYTERHUB_VERSION=5.2.1
ARG JUPYTERLAB_VERSION=4.3.4
ARG CODE_BUILTIN_EXTENSIONS_DIR=/opt/code-server/lib/vscode/extensions
ARG CODE_SERVER_VERSION=4.96.2
ARG NEOVIM_VERSION=0.10.3
ARG GIT_VERSION=2.47.1
ARG GIT_LFS_VERSION=3.6.0
ARG PANDOC_VERSION=3.4
FROM ${BUILD_ON_IMAGE}${PYTHON_VERSION:+:}${PYTHON_VERSION}${CUDA_IMAGE_FLAVOR:+-}${CUDA_IMAGE_FLAVOR} AS files
ARG NB_UID
ENV NB_GID=100
RUN mkdir /files
COPY assets /files
COPY conf/ipython /files
COPY conf/jupyter /files
COPY conf/jupyterlab /files
COPY conf/shell /files
COPY conf${CUDA_IMAGE:+/cuda}/shell /files
COPY conf/user /files
COPY scripts /files
## Copy content of skel directory to backup
RUN cp -a /files/etc/skel/. /files/var/backups/skel \
&& chown -R ${NB_UID}:${NB_GID} /files/var/backups/skel \
## Copy custom fonts
&& mkdir -p /files/usr/local/share/jupyter/lab/static/assets \
&& cp -a /files/opt/code-server/src/browser/media/css \
/files/usr/local/share/jupyter/lab/static/assets \
&& cp -a /files/opt/code-server/src/browser/media/fonts \
/files/usr/local/share/jupyter/lab/static/assets \
&& if [ -n "${CUDA_VERSION}" ]; then \
## Use entrypoint of CUDA image
mv /opt/nvidia/entrypoint.d /opt/nvidia/nvidia_entrypoint.sh \
/files/usr/local/bin; \
mv /files/usr/local/bin/start.sh \
/files/usr/local/bin/entrypoint.d/99-start.sh; \
mv /files/usr/local/bin/nvidia_entrypoint.sh \
/files/usr/local/bin/start.sh; \
fi \
## Ensure file modes are correct when using CI
## Otherwise set to 777 in the target image
&& find /files -type d -exec chmod 755 {} \; \
&& find /files -type f -exec chmod 644 {} \; \
&& find /files/usr/local/bin -type f -exec chmod 755 {} \; \
&& find /files/etc/profile.d -type f -exec chmod 755 {} \;
FROM glcr.b-data.ch/neovim/nvsi:${NEOVIM_VERSION} AS nvsi
FROM glcr.b-data.ch/git/gsi/${GIT_VERSION}/${BASE_IMAGE}:${BASE_IMAGE_TAG} AS gsi
FROM glcr.b-data.ch/git-lfs/glfsi:${GIT_LFS_VERSION} AS glfsi
FROM ${BUILD_ON_IMAGE}${PYTHON_VERSION:+:}${PYTHON_VERSION}${CUDA_IMAGE_FLAVOR:+-}${CUDA_IMAGE_FLAVOR}
ARG DEBIAN_FRONTEND=noninteractive
ARG BUILD_ON_IMAGE
ARG CUDA_IMAGE_FLAVOR
ARG NB_USER
ARG NB_UID
ARG JUPYTERHUB_VERSION
ARG JUPYTERLAB_VERSION
ARG CODE_BUILTIN_EXTENSIONS_DIR
ARG CODE_SERVER_VERSION
ARG NEOVIM_VERSION
ARG GIT_VERSION
ARG GIT_LFS_VERSION
ARG PANDOC_VERSION
ARG BUILD_START
ARG CODE_WORKDIR
ARG CUDA_IMAGE_LICENSE=${CUDA_VERSION:+"NVIDIA Deep Learning Container License"}
ARG IMAGE_LICENSE=${CUDA_IMAGE_LICENSE:-"MIT"}
ARG IMAGE_SOURCE=https://gitlab.b-data.ch/jupyterlab/python/docker-stack
ARG IMAGE_VENDOR="b-data GmbH"
ARG IMAGE_AUTHORS="Olivier Benz <[email protected]>"
LABEL org.opencontainers.image.licenses="$IMAGE_LICENSE" \
org.opencontainers.image.source="$IMAGE_SOURCE" \
org.opencontainers.image.vendor="$IMAGE_VENDOR" \
org.opencontainers.image.authors="$IMAGE_AUTHORS"
ENV PARENT_IMAGE=${BUILD_ON_IMAGE}${PYTHON_VERSION:+:}${PYTHON_VERSION}${CUDA_IMAGE_FLAVOR:+-}${CUDA_IMAGE_FLAVOR} \
NB_USER=${NB_USER} \
NB_UID=${NB_UID} \
JUPYTERHUB_VERSION=${JUPYTERHUB_VERSION} \
JUPYTERLAB_VERSION=${JUPYTERLAB_VERSION} \
CODE_SERVER_VERSION=${CODE_SERVER_VERSION} \
NEOVIM_VERSION=${NEOVIM_VERSION} \
GIT_VERSION=${GIT_VERSION} \
GIT_LFS_VERSION=${GIT_LFS_VERSION} \
PANDOC_VERSION=${PANDOC_VERSION} \
BUILD_DATE=${BUILD_START}
ENV NB_GID=100
## Install Neovim
COPY --from=nvsi /usr/local /usr/local
## Install Git
COPY --from=gsi /usr/local /usr/local
## Install Git LFS
COPY --from=glfsi /usr/local /usr/local
USER root
RUN dpkgArch="$(dpkg --print-architecture)" \
## Unminimise if the system has been minimised
&& if [ $(command -v unminimize) ]; then \
yes | unminimize; \
fi \
&& apt-get update \
&& apt-get -y install --no-install-recommends \
bash-completion \
build-essential \
curl \
file \
fontconfig \
g++ \
gcc \
gfortran \
gnupg \
htop \
info \
jq \
libclang-dev \
man-db \
nano \
ncdu \
procps \
psmisc \
screen \
sudo \
swig \
tmux \
vim-tiny \
wget \
zsh \
## Neovim: Additional runtime recommendations
ripgrep \
## Git: Additional runtime dependencies
libcurl3-gnutls \
liberror-perl \
## Git: Additional runtime recommendations
less \
ssh-client \
## Python: Additional dev dependencies
&& if [ -z "$PYTHON_VERSION" ]; then \
apt-get -y install --no-install-recommends \
python3-dev \
## Install Python package installer
## (dep: python3-distutils, python3-setuptools and python3-wheel)
python3-pip \
## Install venv module for python3
python3-venv; \
## make some useful symlinks that are expected to exist
## ("/usr/bin/python" and friends)
for src in pydoc3 python3 python3-config; do \
dst="$(echo "$src" | tr -d 3)"; \
if [ -s "/usr/bin/$src" ] && [ ! -e "/usr/bin/$dst" ]; then \
ln -svT "$src" "/usr/bin/$dst"; \
fi \
done; \
else \
## Force update pip, setuptools and wheel
pip install --upgrade --force-reinstall pip; \
fi \
## Install font MesloLGS NF
&& mkdir -p /usr/share/fonts/truetype/meslo \
&& curl -sL https://github.com/romkatv/powerlevel10k-media/raw/master/MesloLGS%20NF%20Regular.ttf -o "/usr/share/fonts/truetype/meslo/MesloLGS NF Regular.ttf" \
&& curl -sL https://github.com/romkatv/powerlevel10k-media/raw/master/MesloLGS%20NF%20Bold.ttf -o "/usr/share/fonts/truetype/meslo/MesloLGS NF Bold.ttf" \
&& curl -sL https://github.com/romkatv/powerlevel10k-media/raw/master/MesloLGS%20NF%20Italic.ttf -o "/usr/share/fonts/truetype/meslo/MesloLGS NF Italic.ttf" \
&& curl -sL https://github.com/romkatv/powerlevel10k-media/raw/master/MesloLGS%20NF%20Bold%20Italic.ttf -o "/usr/share/fonts/truetype/meslo/MesloLGS NF Bold Italic.ttf" \
&& fc-cache -fsv \
## Git: Set default branch name to main
&& git config --system init.defaultBranch main \
## Git: Store passwords for one hour in memory
&& git config --system credential.helper "cache --timeout=3600" \
## Git: Merge the default branch from the default remote when "git pull" is run
&& git config --system pull.rebase false \
## Install pandoc
&& curl -sLO https://github.com/jgm/pandoc/releases/download/${PANDOC_VERSION}/pandoc-${PANDOC_VERSION}-1-${dpkgArch}.deb \
&& dpkg -i pandoc-${PANDOC_VERSION}-1-${dpkgArch}.deb \
&& rm pandoc-${PANDOC_VERSION}-1-${dpkgArch}.deb \
## Delete potential user with UID 1000
&& if grep -q 1000 /etc/passwd; then \
userdel --remove $(id -un 1000); \
fi \
## Do not set user limits for sudo/sudo-i
&& sed -i 's/.*pam_limits.so/#&/g' /etc/pam.d/sudo \
&& if [ -f "/etc/pam.d/sudo-i" ]; then \
sed -i 's/.*pam_limits.so/#&/g' /etc/pam.d/sudo-i; \
fi \
## Add user
&& useradd -l -m -s $(which zsh) -N -u ${NB_UID} ${NB_USER} \
## Mark home directory as populated
&& touch /home/${NB_USER}/.populated \
&& chown ${NB_UID}:${NB_GID} /home/${NB_USER}/.populated \
&& chmod go+w /home/${NB_USER}/.populated \
## Create backup directory for home directory
&& mkdir -p /var/backups/skel \
&& chown ${NB_UID}:${NB_GID} /var/backups/skel \
## Install Tini
&& curl -sL https://github.com/krallin/tini/releases/download/v0.19.0/tini-${dpkgArch} -o /usr/local/bin/tini \
&& chmod +x /usr/local/bin/tini \
## Clean up
&& rm -rf /tmp/* \
&& rm -rf /var/lib/apt/lists/* \
${HOME}/.cache
ENV PATH=/opt/code-server/bin:$PATH \
CS_DISABLE_GETTING_STARTED_OVERRIDE=1
## Install code-server
RUN mkdir /opt/code-server \
&& cd /opt/code-server \
&& curl -sL https://github.com/coder/code-server/releases/download/v${CODE_SERVER_VERSION}/code-server-${CODE_SERVER_VERSION}-linux-$(dpkg --print-architecture).tar.gz | tar zxf - --no-same-owner --strip-components=1 \
## Copy custom fonts
&& mkdir -p /opt/code-server/src/browser/media/fonts \
&& cp -a /usr/share/fonts/truetype/meslo/*.ttf /opt/code-server/src/browser/media/fonts \
## Include custom fonts
&& sed -i 's|</head>| <link rel="preload" href="{{BASE}}/_static/src/browser/media/fonts/MesloLGS NF Regular.woff2" as="font" type="font/woff2" crossorigin="anonymous">\n </head>|g' /opt/code-server/lib/vscode/out/vs/code/browser/workbench/workbench.html \
&& sed -i 's|</head>| <link rel="preload" href="{{BASE}}/_static/src/browser/media/fonts/MesloLGS NF Italic.woff2" as="font" type="font/woff2" crossorigin="anonymous">\n </head>|g' /opt/code-server/lib/vscode/out/vs/code/browser/workbench/workbench.html \
&& sed -i 's|</head>| <link rel="preload" href="{{BASE}}/_static/src/browser/media/fonts/MesloLGS NF Bold.woff2" as="font" type="font/woff2" crossorigin="anonymous">\n </head>|g' /opt/code-server/lib/vscode/out/vs/code/browser/workbench/workbench.html \
&& sed -i 's|</head>| <link rel="preload" href="{{BASE}}/_static/src/browser/media/fonts/MesloLGS NF Bold Italic.woff2" as="font" type="font/woff2" crossorigin="anonymous">\n </head>|g' /opt/code-server/lib/vscode/out/vs/code/browser/workbench/workbench.html \
&& sed -i 's|</head>| <link rel="stylesheet" type="text/css" href="{{BASE}}/_static/src/browser/media/css/fonts.css">\n </head>|g' /opt/code-server/lib/vscode/out/vs/code/browser/workbench/workbench.html \
## Install code-server extensions
&& cd /tmp \
&& curl -sLO https://dl.b-data.ch/vsix/piotrpalarz.vscode-gitignore-generator-1.0.3.vsix \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension piotrpalarz.vscode-gitignore-generator-1.0.3.vsix \
&& curl -sLO https://dl.b-data.ch/vsix/mutantdino.resourcemonitor-1.0.7.vsix \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension mutantdino.resourcemonitor-1.0.7.vsix \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension alefragnani.project-manager \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension GitHub.vscode-pull-request-github \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension GitLab.gitlab-workflow \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension ms-python.python \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension ms-toolsai.jupyter \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension christian-kohler.path-intellisense \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension [email protected] \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension mhutchie.git-graph \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension redhat.vscode-yaml \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension grapecity.gc-excelviewer \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension editorconfig.editorconfig \
&& code-server --extensions-dir ${CODE_BUILTIN_EXTENSIONS_DIR} --install-extension DavidAnson.vscode-markdownlint \
## Create folders temp and tmp for Jupyter extension
&& cd /opt/code-server/lib/vscode/extensions/ms-toolsai.jupyter-* \
&& mkdir -m 1777 temp \
&& mkdir -m 1777 tmp \
## Clean up
&& rm -rf /tmp/* \
${HOME}/.config \
${HOME}/.local
## Install JupyterLab
RUN export PIP_BREAK_SYSTEM_PACKAGES=1 \
&& pip install \
jupyter-server-proxy \
jupyterhub==${JUPYTERHUB_VERSION} \
jupyterlab==${JUPYTERLAB_VERSION} \
jupyterlab-git \
jupyterlab-lsp \
notebook \
nbclassic \
nbconvert \
python-lsp-server[all] \
## Jupyter Server Proxy: Set maximum allowed HTTP body size to 10 GiB
&& sed -i 's/AsyncHTTPClient(/AsyncHTTPClient(max_body_size=10737418240, /g' \
/usr/local/lib/python*/*-packages/jupyter_server_proxy/handlers.py \
## Jupyter Server Proxy: Set maximum allowed websocket message size to 1 GiB
&& sed -i 's/"_default_max_message_size",.*$/"_default_max_message_size", 1024 \* 1024 \* 1024/g' \
/usr/local/lib/python*/*-packages/jupyter_server_proxy/websocket.py \
&& sed -i 's/_default_max_message_size =.*$/_default_max_message_size = 1024 \* 1024 \* 1024/g' \
/usr/local/lib/python*/*-packages/tornado/websocket.py \
## Copy custom fonts
&& mkdir -p /usr/local/share/jupyter/lab/static/assets/fonts \
&& cp -a /usr/share/fonts/truetype/meslo/*.ttf /usr/local/share/jupyter/lab/static/assets/fonts \
## Include custom fonts
&& sed -i 's|</head>|<link rel="preload" href="{{page_config.fullStaticUrl}}/assets/fonts/MesloLGS NF Regular.woff2" as="font" type="font/woff2" crossorigin="anonymous"></head>|g' /usr/local/share/jupyter/lab/static/index.html \
&& sed -i 's|</head>|<link rel="preload" href="{{page_config.fullStaticUrl}}/assets/fonts/MesloLGS NF Italic.woff2" as="font" type="font/woff2" crossorigin="anonymous"></head>|g' /usr/local/share/jupyter/lab/static/index.html \
&& sed -i 's|</head>|<link rel="preload" href="{{page_config.fullStaticUrl}}/assets/fonts/MesloLGS NF Bold.woff2" as="font" type="font/woff2" crossorigin="anonymous"></head>|g' /usr/local/share/jupyter/lab/static/index.html \
&& sed -i 's|</head>|<link rel="preload" href="{{page_config.fullStaticUrl}}/assets/fonts/MesloLGS NF Bold Italic.woff2" as="font" type="font/woff2" crossorigin="anonymous"></head>|g' /usr/local/share/jupyter/lab/static/index.html \
&& sed -i 's|</head>|<link rel="stylesheet" type="text/css" href="{{page_config.fullStaticUrl}}/assets/css/fonts.css"></head>|g' /usr/local/share/jupyter/lab/static/index.html \
## Clean up
&& rm -rf /tmp/* \
${HOME}/.cache
## Switch back to ${NB_USER} to avoid accidental container runs as root
USER ${NB_USER}
ENV HOME=/home/${NB_USER} \
CODE_WORKDIR=${CODE_WORKDIR:-/home/${NB_USER}/projects} \
SHELL=/usr/bin/zsh \
TERM=xterm-256color
WORKDIR ${HOME}
## Install Oh My Zsh with Powerlevel10k theme
RUN sh -c "$(curl -fsSL https://raw.githubusercontent.com/ohmyzsh/ohmyzsh/master/tools/install.sh)" "" --unattended \
&& git clone --depth=1 https://github.com/romkatv/powerlevel10k.git ${HOME}/.oh-my-zsh/custom/themes/powerlevel10k \
&& ${HOME}/.oh-my-zsh/custom/themes/powerlevel10k/gitstatus/install -f \
&& sed -i 's/ZSH="\/home\/jovyan\/.oh-my-zsh"/ZSH="$HOME\/.oh-my-zsh"/g' ${HOME}/.zshrc \
&& sed -i 's/ZSH_THEME="robbyrussell"/ZSH_THEME="powerlevel10k\/powerlevel10k"/g' ${HOME}/.zshrc \
&& echo "\n# set PATH so it includes user's private bin if it exists\nif [ -d \"\$HOME/bin\" ] && [[ \"\$PATH\" != *\"\$HOME/bin\"* ]] ; then\n PATH=\"\$HOME/bin:\$PATH\"\nfi" | tee -a ${HOME}/.bashrc ${HOME}/.zshrc \
&& echo "\n# set PATH so it includes user's private bin if it exists\nif [ -d \"\$HOME/.local/bin\" ] && [[ \"\$PATH\" != *\"\$HOME/.local/bin\"* ]] ; then\n PATH=\"\$HOME/.local/bin:\$PATH\"\nfi" | tee -a ${HOME}/.bashrc ${HOME}/.zshrc \
&& echo "\n# Update last-activity timestamps while in screen/tmux session\nif [ ! -z \"\$TMUX\" -o ! -z \"\$STY\" ] ; then\n busy &\nfi" >> ${HOME}/.bashrc \
&& echo "\n# Update last-activity timestamps while in screen/tmux session\nif [ ! -z \"\$TMUX\" -o ! -z \"\$STY\" ] ; then\n setopt nocheckjobs\n busy &\nfi" >> ${HOME}/.zshrc \
&& echo "\n# To customize prompt, run \`p10k configure\` or edit ~/.p10k.zsh." >> ${HOME}/.zshrc \
&& echo "[[ ! -f ~/.p10k.zsh ]] || source ~/.p10k.zsh" >> ${HOME}/.zshrc \
## Create user's private bin
&& mkdir -p ${HOME}/.local/bin \
## Record population timestamp
&& date -uIseconds > ${HOME}/.populated \
## Create backup of home directory
&& cp -a ${HOME}/. /var/backups/skel
## Copy files as late as possible to avoid cache busting
COPY --from=files /files /
COPY --from=files /files/var/backups/skel ${HOME}
EXPOSE 8888
## Configure container startup
ENTRYPOINT ["tini", "-g", "--", "start.sh"]
CMD ["start-notebook.sh"]