genetic_algorithm_optimization.py

import random
import numpy as np
from concurrent.futures import ThreadPoolExecutor


# Parameters
N_POPULATION = 100  # Population size
N_GENERATIONS = 500  # Maximum number of generations
N_SELECTED = 50  # Number of parents selected for the next generation
MUTATION_PROBABILITY = 0.1  # Mutation probability
CROSSOVER_RATE = 0.8  # Probability of crossover
SEARCH_SPACE = (-10, 10)  # Search space for the variables


# Random number generator
rng = np.random.default_rng()


class GeneticAlgorithm:
    def __init__(
        self,
        function: callable,
        bounds: list[tuple[float, float]],
        population_size: int,
        generations: int,
        mutation_prob: float,
        crossover_rate: float,
        maximize: bool = True,
    ) -> None:
        self.function = function  # Target function to optimize
        self.bounds = bounds  # Search space bounds (for each variable)
        self.population_size = population_size
        self.generations = generations
        self.mutation_prob = mutation_prob
        self.crossover_rate = crossover_rate
        self.maximize = maximize
        self.dim = len(bounds)  # Dimensionality of the function (number of variables)

        # Initialize population
        self.population = self.initialize_population()

    def initialize_population(self) -> list[np.ndarray]:
        """
        Initialize the population with random individuals within the search space.

        Returns:
            list[np.ndarray]: A list of individuals represented as numpy arrays.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: x**2 + y**2, [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, False)
        >>> len(ga.initialize_population()) == ga.population_size
        True
        """
        return [
            rng.uniform(low=self.bounds[i][0], high=self.bounds[i][1], size=self.dim)
            for i in range(self.population_size)
        ]

    def fitness(self, individual: np.ndarray) -> float:
        """
        Calculate the fitness value (function value) for an individual.

        Args:
            individual (np.ndarray): The individual to evaluate.

        Returns:
            float: The fitness value of the individual.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, True)
        >>> ind = np.array([1, 2])
        >>> ga.fitness(ind)
        -5.0
        """
        value = self.function(*individual)
        return value if self.maximize else -value  # If minimizing, invert the fitness

    def select_parents(
        self, population_score: list[tuple[np.ndarray, float]]
    ) -> list[np.ndarray]:
        """
        Select top N_SELECTED parents based on fitness.

        Args:
            population_score (list[tuple[np.ndarray, float]]): The population with their respective fitness scores.

        Returns:
            list[np.ndarray]: The selected parents for the next generation.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, True)
        >>> pop_score = [(np.array([1, 2]), -5), (np.array([3, 4]), -25)]
        >>> len(ga.select_parents(pop_score)) == N_SELECTED
        True
        """
        population_score.sort(key=lambda score_tuple: score_tuple[1], reverse=True)
        return [ind for ind, _ in population_score[:N_SELECTED]]

    def crossover(
        self, parent1: np.ndarray, parent2: np.ndarray
    ) -> tuple[np.ndarray, np.ndarray]:
        """
        Perform uniform crossover between two parents to generate offspring.

        Args:
            parent1 (np.ndarray): The first parent.
            parent2 (np.ndarray): The second parent.

        Returns:
            tuple[np.ndarray, np.ndarray]: The two offspring generated by crossover.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, True)
        >>> parent1, parent2 = np.array([1, 2]), np.array([3, 4])
        >>> len(ga.crossover(parent1, parent2)) == 2
        True
        """
        if random.random() < self.crossover_rate:
            cross_point = random.randint(1, self.dim - 1)
            child1 = np.concatenate((parent1[:cross_point], parent2[cross_point:]))
            child2 = np.concatenate((parent2[:cross_point], parent1[cross_point:]))
            return child1, child2
        return parent1, parent2

    def mutate(self, individual: np.ndarray) -> np.ndarray:
        """
        Apply mutation to an individual.

        Args:
            individual (np.ndarray): The individual to mutate.

        Returns:
            np.ndarray: The mutated individual.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, True)
        >>> ind = np.array([1.0, 2.0])
        >>> mutated = ga.mutate(ind)
        >>> len(mutated) == 2  # Ensure it still has the correct number of dimensions
        True
        """
        for i in range(self.dim):
            if random.random() < self.mutation_prob:
                individual[i] = rng.uniform(self.bounds[i][0], self.bounds[i][1])
        return individual

    def evaluate_population(self) -> list[tuple[np.ndarray, float]]:
        """
        Evaluate the fitness of the entire population in parallel.

        Returns:
            list[tuple[np.ndarray, float]]: The population with their respective fitness values.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 100, 0.1, 0.8, True)
        >>> eval_population = ga.evaluate_population()
        >>> len(eval_population) == ga.population_size  # Ensure the population size is correct
        True
        >>> all(isinstance(ind, tuple) and isinstance(ind[1], float) for ind in eval_population)
        True
        """
        with ThreadPoolExecutor() as executor:
            return list(
                executor.map(
                    lambda individual: (individual, self.fitness(individual)),
                    self.population,
                )
            )

    def evolve(self) -> np.ndarray:
        """
        Evolve the population over the generations to find the best solution.

        Returns:
            np.ndarray: The best individual found during the evolution process.

        Example:
        >>> ga = GeneticAlgorithm(lambda x, y: -(x**2 + y**2), [(-10, 10), (-10, 10)], 10, 10, 0.1, 0.8, True)
        >>> best_solution = ga.evolve()
        >>> len(best_solution) == 2  # Ensure the best solution is a valid individual with correct dimensions
        True
        """
        for generation in range(self.generations):
            # Evaluate population fitness (multithreaded)
            population_score = self.evaluate_population()

            # Check the best individual
            best_individual = max(
                population_score, key=lambda score_tuple: score_tuple[1]
            )[0]
            best_fitness = self.fitness(best_individual)

            # Select parents for next generation
            parents = self.select_parents(population_score)
            next_generation = []

            # Generate offspring using crossover and mutation
            for i in range(0, len(parents), 2):
                parent1, parent2 = parents[i], parents[(i + 1) % len(parents)]
                child1, child2 = self.crossover(parent1, parent2)
                next_generation.append(self.mutate(child1))
                next_generation.append(self.mutate(child2))

            # Ensure population size remains the same
            self.population = next_generation[: self.population_size]

            if generation % 10 == 0:
                print(f"Generation {generation}: Best Fitness = {best_fitness}")

        return best_individual


# Example target function for optimization
def target_function(var_x: float, var_y: float) -> float:
    """
    Example target function (parabola) for optimization.

    Args:
        var_x (float): The x-coordinate.
        var_y (float): The y-coordinate.

    Returns:
        float: The value of the function at (var_x, var_y).

    Example:
    >>> target_function(0, 0)
    0
    >>> target_function(1, 1)
    2
    """
    return var_x**2 + var_y**2  # Simple parabolic surface (minimization)


# Set bounds for the variables (var_x, var_y)
bounds = [(-10, 10), (-10, 10)]  # Both var_x and var_y range from -10 to 10


# Instantiate and run the genetic algorithm
ga = GeneticAlgorithm(
    function=target_function,
    bounds=bounds,
    population_size=N_POPULATION,
    generations=N_GENERATIONS,
    mutation_prob=MUTATION_PROBABILITY,
    crossover_rate=CROSSOVER_RATE,
    maximize=False,  # Minimize the function
)


best_solution = ga.evolve()
print(f"Best solution found: {best_solution}")
print(f"Best fitness (minimum value of function): {target_function(*best_solution)}")