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test_common.py
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"""
Tests that work on both the Python and C engines but do not have a
specific classification into the other test modules.
"""
import codecs
from collections import OrderedDict
import csv
from datetime import datetime
from io import BytesIO, StringIO
import os
import platform
from tempfile import TemporaryFile
from urllib.error import URLError
import numpy as np
import pytest
from pandas._libs.tslib import Timestamp
from pandas.errors import DtypeWarning, EmptyDataError, ParserError
from pandas import DataFrame, Index, MultiIndex, Series, compat, concat
import pandas.util.testing as tm
from pandas.io.parsers import CParserWrapper, TextFileReader, TextParser
def test_override_set_noconvert_columns():
# see gh-17351
#
# Usecols needs to be sorted in _set_noconvert_columns based
# on the test_usecols_with_parse_dates test from test_usecols.py
class MyTextFileReader(TextFileReader):
def __init__(self):
self._currow = 0
self.squeeze = False
class MyCParserWrapper(CParserWrapper):
def _set_noconvert_columns(self):
if self.usecols_dtype == "integer":
# self.usecols is a set, which is documented as unordered
# but in practice, a CPython set of integers is sorted.
# In other implementations this assumption does not hold.
# The following code simulates a different order, which
# before GH 17351 would cause the wrong columns to be
# converted via the parse_dates parameter
self.usecols = list(self.usecols)
self.usecols.reverse()
return CParserWrapper._set_noconvert_columns(self)
data = """a,b,c,d,e
0,1,20140101,0900,4
0,1,20140102,1000,4"""
parse_dates = [[1, 2]]
cols = {
"a": [0, 0],
"c_d": [Timestamp("2014-01-01 09:00:00"), Timestamp("2014-01-02 10:00:00")],
}
expected = DataFrame(cols, columns=["c_d", "a"])
parser = MyTextFileReader()
parser.options = {
"usecols": [0, 2, 3],
"parse_dates": parse_dates,
"delimiter": ",",
}
parser._engine = MyCParserWrapper(StringIO(data), **parser.options)
result = parser.read()
tm.assert_frame_equal(result, expected)
def test_bytes_io_input(all_parsers):
encoding = "cp1255"
parser = all_parsers
data = BytesIO("שלום:1234\n562:123".encode(encoding))
result = parser.read_csv(data, sep=":", encoding=encoding)
expected = DataFrame([[562, 123]], columns=["שלום", "1234"])
tm.assert_frame_equal(result, expected)
def test_empty_decimal_marker(all_parsers):
data = """A|B|C
1|2,334|5
10|13|10.
"""
# Parsers support only length-1 decimals
msg = "Only length-1 decimal markers supported"
parser = all_parsers
with pytest.raises(ValueError, match=msg):
parser.read_csv(StringIO(data), decimal="")
def test_bad_stream_exception(all_parsers, csv_dir_path):
# see gh-13652
#
# This test validates that both the Python engine and C engine will
# raise UnicodeDecodeError instead of C engine raising ParserError
# and swallowing the exception that caused read to fail.
path = os.path.join(csv_dir_path, "sauron.SHIFT_JIS.csv")
codec = codecs.lookup("utf-8")
utf8 = codecs.lookup("utf-8")
parser = all_parsers
msg = "'utf-8' codec can't decode byte"
# Stream must be binary UTF8.
with open(path, "rb") as handle, codecs.StreamRecoder(
handle, utf8.encode, utf8.decode, codec.streamreader, codec.streamwriter
) as stream:
with pytest.raises(UnicodeDecodeError, match=msg):
parser.read_csv(stream)
def test_read_csv_local(all_parsers, csv1):
prefix = "file:///" if compat.is_platform_windows() else "file://"
parser = all_parsers
fname = prefix + str(os.path.abspath(csv1))
result = parser.read_csv(fname, index_col=0, parse_dates=True)
expected = DataFrame(
[
[0.980269, 3.685731, -0.364216805298, -1.159738],
[1.047916, -0.041232, -0.16181208307, 0.212549],
[0.498581, 0.731168, -0.537677223318, 1.346270],
[1.120202, 1.567621, 0.00364077397681, 0.675253],
[-0.487094, 0.571455, -1.6116394093, 0.103469],
[0.836649, 0.246462, 0.588542635376, 1.062782],
[-0.157161, 1.340307, 1.1957779562, -1.097007],
],
columns=["A", "B", "C", "D"],
index=Index(
[
datetime(2000, 1, 3),
datetime(2000, 1, 4),
datetime(2000, 1, 5),
datetime(2000, 1, 6),
datetime(2000, 1, 7),
datetime(2000, 1, 10),
datetime(2000, 1, 11),
],
name="index",
),
)
tm.assert_frame_equal(result, expected)
def test_1000_sep(all_parsers):
parser = all_parsers
data = """A|B|C
1|2,334|5
10|13|10.
"""
expected = DataFrame({"A": [1, 10], "B": [2334, 13], "C": [5, 10.0]})
result = parser.read_csv(StringIO(data), sep="|", thousands=",")
tm.assert_frame_equal(result, expected)
def test_squeeze(all_parsers):
data = """\
a,1
b,2
c,3
"""
parser = all_parsers
index = Index(["a", "b", "c"], name=0)
expected = Series([1, 2, 3], name=1, index=index)
result = parser.read_csv(StringIO(data), index_col=0, header=None, squeeze=True)
tm.assert_series_equal(result, expected)
# see gh-8217
#
# Series should not be a view.
assert not result._is_view
def test_malformed(all_parsers):
# see gh-6607
parser = all_parsers
data = """ignore
A,B,C
1,2,3 # comment
1,2,3,4,5
2,3,4
"""
msg = "Expected 3 fields in line 4, saw 5"
with pytest.raises(ParserError, match=msg):
parser.read_csv(StringIO(data), header=1, comment="#")
@pytest.mark.parametrize("nrows", [5, 3, None])
def test_malformed_chunks(all_parsers, nrows):
data = """ignore
A,B,C
skip
1,2,3
3,5,10 # comment
1,2,3,4,5
2,3,4
"""
parser = all_parsers
msg = "Expected 3 fields in line 6, saw 5"
reader = parser.read_csv(
StringIO(data), header=1, comment="#", iterator=True, chunksize=1, skiprows=[2]
)
with pytest.raises(ParserError, match=msg):
reader.read(nrows)
def test_unnamed_columns(all_parsers):
data = """A,B,C,,
1,2,3,4,5
6,7,8,9,10
11,12,13,14,15
"""
parser = all_parsers
expected = DataFrame(
[[1, 2, 3, 4, 5], [6, 7, 8, 9, 10], [11, 12, 13, 14, 15]],
dtype=np.int64,
columns=["A", "B", "C", "Unnamed: 3", "Unnamed: 4"],
)
result = parser.read_csv(StringIO(data))
tm.assert_frame_equal(result, expected)
def test_csv_mixed_type(all_parsers):
data = """A,B,C
a,1,2
b,3,4
c,4,5
"""
parser = all_parsers
expected = DataFrame({"A": ["a", "b", "c"], "B": [1, 3, 4], "C": [2, 4, 5]})
result = parser.read_csv(StringIO(data))
tm.assert_frame_equal(result, expected)
def test_read_csv_low_memory_no_rows_with_index(all_parsers):
# see gh-21141
parser = all_parsers
if not parser.low_memory:
pytest.skip("This is a low-memory specific test")
data = """A,B,C
1,1,1,2
2,2,3,4
3,3,4,5
"""
result = parser.read_csv(StringIO(data), low_memory=True, index_col=0, nrows=0)
expected = DataFrame(columns=["A", "B", "C"])
tm.assert_frame_equal(result, expected)
def test_read_csv_dataframe(all_parsers, csv1):
parser = all_parsers
result = parser.read_csv(csv1, index_col=0, parse_dates=True)
expected = DataFrame(
[
[0.980269, 3.685731, -0.364216805298, -1.159738],
[1.047916, -0.041232, -0.16181208307, 0.212549],
[0.498581, 0.731168, -0.537677223318, 1.346270],
[1.120202, 1.567621, 0.00364077397681, 0.675253],
[-0.487094, 0.571455, -1.6116394093, 0.103469],
[0.836649, 0.246462, 0.588542635376, 1.062782],
[-0.157161, 1.340307, 1.1957779562, -1.097007],
],
columns=["A", "B", "C", "D"],
index=Index(
[
datetime(2000, 1, 3),
datetime(2000, 1, 4),
datetime(2000, 1, 5),
datetime(2000, 1, 6),
datetime(2000, 1, 7),
datetime(2000, 1, 10),
datetime(2000, 1, 11),
],
name="index",
),
)
tm.assert_frame_equal(result, expected)
def test_read_csv_no_index_name(all_parsers, csv_dir_path):
parser = all_parsers
csv2 = os.path.join(csv_dir_path, "test2.csv")
result = parser.read_csv(csv2, index_col=0, parse_dates=True)
expected = DataFrame(
[
[0.980269, 3.685731, -0.364216805298, -1.159738, "foo"],
[1.047916, -0.041232, -0.16181208307, 0.212549, "bar"],
[0.498581, 0.731168, -0.537677223318, 1.346270, "baz"],
[1.120202, 1.567621, 0.00364077397681, 0.675253, "qux"],
[-0.487094, 0.571455, -1.6116394093, 0.103469, "foo2"],
],
columns=["A", "B", "C", "D", "E"],
index=Index(
[
datetime(2000, 1, 3),
datetime(2000, 1, 4),
datetime(2000, 1, 5),
datetime(2000, 1, 6),
datetime(2000, 1, 7),
]
),
)
tm.assert_frame_equal(result, expected)
def test_read_csv_unicode(all_parsers):
parser = all_parsers
data = BytesIO("\u0141aski, Jan;1".encode("utf-8"))
result = parser.read_csv(data, sep=";", encoding="utf-8", header=None)
expected = DataFrame([["\u0141aski, Jan", 1]])
tm.assert_frame_equal(result, expected)
def test_read_csv_wrong_num_columns(all_parsers):
# Too few columns.
data = """A,B,C,D,E,F
1,2,3,4,5,6
6,7,8,9,10,11,12
11,12,13,14,15,16
"""
parser = all_parsers
msg = "Expected 6 fields in line 3, saw 7"
with pytest.raises(ParserError, match=msg):
parser.read_csv(StringIO(data))
def test_read_duplicate_index_explicit(all_parsers):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo,12,13,14,15
bar,12,13,14,15
"""
parser = all_parsers
result = parser.read_csv(StringIO(data), index_col=0)
expected = DataFrame(
[
[2, 3, 4, 5],
[7, 8, 9, 10],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
],
columns=["A", "B", "C", "D"],
index=Index(["foo", "bar", "baz", "qux", "foo", "bar"], name="index"),
)
tm.assert_frame_equal(result, expected)
def test_read_duplicate_index_implicit(all_parsers):
data = """A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo,12,13,14,15
bar,12,13,14,15
"""
parser = all_parsers
result = parser.read_csv(StringIO(data))
expected = DataFrame(
[
[2, 3, 4, 5],
[7, 8, 9, 10],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
],
columns=["A", "B", "C", "D"],
index=Index(["foo", "bar", "baz", "qux", "foo", "bar"]),
)
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize(
"data,kwargs,expected",
[
(
"A,B\nTrue,1\nFalse,2\nTrue,3",
dict(),
DataFrame([[True, 1], [False, 2], [True, 3]], columns=["A", "B"]),
),
(
"A,B\nYES,1\nno,2\nyes,3\nNo,3\nYes,3",
dict(true_values=["yes", "Yes", "YES"], false_values=["no", "NO", "No"]),
DataFrame(
[[True, 1], [False, 2], [True, 3], [False, 3], [True, 3]],
columns=["A", "B"],
),
),
(
"A,B\nTRUE,1\nFALSE,2\nTRUE,3",
dict(),
DataFrame([[True, 1], [False, 2], [True, 3]], columns=["A", "B"]),
),
(
"A,B\nfoo,bar\nbar,foo",
dict(true_values=["foo"], false_values=["bar"]),
DataFrame([[True, False], [False, True]], columns=["A", "B"]),
),
],
)
def test_parse_bool(all_parsers, data, kwargs, expected):
parser = all_parsers
result = parser.read_csv(StringIO(data), **kwargs)
tm.assert_frame_equal(result, expected)
def test_int_conversion(all_parsers):
data = """A,B
1.0,1
2.0,2
3.0,3
"""
parser = all_parsers
result = parser.read_csv(StringIO(data))
expected = DataFrame([[1.0, 1], [2.0, 2], [3.0, 3]], columns=["A", "B"])
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize("nrows", [3, 3.0])
def test_read_nrows(all_parsers, nrows):
# see gh-10476
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
expected = DataFrame(
[["foo", 2, 3, 4, 5], ["bar", 7, 8, 9, 10], ["baz", 12, 13, 14, 15]],
columns=["index", "A", "B", "C", "D"],
)
parser = all_parsers
result = parser.read_csv(StringIO(data), nrows=nrows)
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize("nrows", [1.2, "foo", -1])
def test_read_nrows_bad(all_parsers, nrows):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
msg = r"'nrows' must be an integer >=0"
parser = all_parsers
with pytest.raises(ValueError, match=msg):
parser.read_csv(StringIO(data), nrows=nrows)
@pytest.mark.parametrize("index_col", [0, "index"])
def test_read_chunksize_with_index(all_parsers, index_col):
parser = all_parsers
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
reader = parser.read_csv(StringIO(data), index_col=0, chunksize=2)
expected = DataFrame(
[
["foo", 2, 3, 4, 5],
["bar", 7, 8, 9, 10],
["baz", 12, 13, 14, 15],
["qux", 12, 13, 14, 15],
["foo2", 12, 13, 14, 15],
["bar2", 12, 13, 14, 15],
],
columns=["index", "A", "B", "C", "D"],
)
expected = expected.set_index("index")
chunks = list(reader)
tm.assert_frame_equal(chunks[0], expected[:2])
tm.assert_frame_equal(chunks[1], expected[2:4])
tm.assert_frame_equal(chunks[2], expected[4:])
@pytest.mark.parametrize("chunksize", [1.3, "foo", 0])
def test_read_chunksize_bad(all_parsers, chunksize):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
msg = r"'chunksize' must be an integer >=1"
with pytest.raises(ValueError, match=msg):
parser.read_csv(StringIO(data), chunksize=chunksize)
@pytest.mark.parametrize("chunksize", [2, 8])
def test_read_chunksize_and_nrows(all_parsers, chunksize):
# see gh-15755
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
kwargs = dict(index_col=0, nrows=5)
reader = parser.read_csv(StringIO(data), chunksize=chunksize, **kwargs)
expected = parser.read_csv(StringIO(data), **kwargs)
tm.assert_frame_equal(concat(reader), expected)
def test_read_chunksize_and_nrows_changing_size(all_parsers):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
kwargs = dict(index_col=0, nrows=5)
reader = parser.read_csv(StringIO(data), chunksize=8, **kwargs)
expected = parser.read_csv(StringIO(data), **kwargs)
tm.assert_frame_equal(reader.get_chunk(size=2), expected.iloc[:2])
tm.assert_frame_equal(reader.get_chunk(size=4), expected.iloc[2:5])
with pytest.raises(StopIteration, match=""):
reader.get_chunk(size=3)
def test_get_chunk_passed_chunksize(all_parsers):
parser = all_parsers
data = """A,B,C
1,2,3
4,5,6
7,8,9
1,2,3"""
reader = parser.read_csv(StringIO(data), chunksize=2)
result = reader.get_chunk()
expected = DataFrame([[1, 2, 3], [4, 5, 6]], columns=["A", "B", "C"])
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize("kwargs", [dict(), dict(index_col=0)])
def test_read_chunksize_compat(all_parsers, kwargs):
# see gh-12185
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
reader = parser.read_csv(StringIO(data), chunksize=2, **kwargs)
result = parser.read_csv(StringIO(data), **kwargs)
tm.assert_frame_equal(concat(reader), result)
def test_read_chunksize_jagged_names(all_parsers):
# see gh-23509
parser = all_parsers
data = "\n".join(["0"] * 7 + [",".join(["0"] * 10)])
expected = DataFrame([[0] + [np.nan] * 9] * 7 + [[0] * 10])
reader = parser.read_csv(StringIO(data), names=range(10), chunksize=4)
result = concat(reader)
tm.assert_frame_equal(result, expected)
def test_read_data_list(all_parsers):
parser = all_parsers
kwargs = dict(index_col=0)
data = "A,B,C\nfoo,1,2,3\nbar,4,5,6"
data_list = [["A", "B", "C"], ["foo", "1", "2", "3"], ["bar", "4", "5", "6"]]
expected = parser.read_csv(StringIO(data), **kwargs)
parser = TextParser(data_list, chunksize=2, **kwargs)
result = parser.read()
tm.assert_frame_equal(result, expected)
def test_iterator(all_parsers):
# see gh-6607
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
kwargs = dict(index_col=0)
expected = parser.read_csv(StringIO(data), **kwargs)
reader = parser.read_csv(StringIO(data), iterator=True, **kwargs)
first_chunk = reader.read(3)
tm.assert_frame_equal(first_chunk, expected[:3])
last_chunk = reader.read(5)
tm.assert_frame_equal(last_chunk, expected[3:])
def test_iterator2(all_parsers):
parser = all_parsers
data = """A,B,C
foo,1,2,3
bar,4,5,6
baz,7,8,9
"""
reader = parser.read_csv(StringIO(data), iterator=True)
result = list(reader)
expected = DataFrame(
[[1, 2, 3], [4, 5, 6], [7, 8, 9]],
index=["foo", "bar", "baz"],
columns=["A", "B", "C"],
)
tm.assert_frame_equal(result[0], expected)
def test_reader_list(all_parsers):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
kwargs = dict(index_col=0)
lines = list(csv.reader(StringIO(data)))
reader = TextParser(lines, chunksize=2, **kwargs)
expected = parser.read_csv(StringIO(data), **kwargs)
chunks = list(reader)
tm.assert_frame_equal(chunks[0], expected[:2])
tm.assert_frame_equal(chunks[1], expected[2:4])
tm.assert_frame_equal(chunks[2], expected[4:])
def test_reader_list_skiprows(all_parsers):
data = """index,A,B,C,D
foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
"""
parser = all_parsers
kwargs = dict(index_col=0)
lines = list(csv.reader(StringIO(data)))
reader = TextParser(lines, chunksize=2, skiprows=[1], **kwargs)
expected = parser.read_csv(StringIO(data), **kwargs)
chunks = list(reader)
tm.assert_frame_equal(chunks[0], expected[1:3])
def test_iterator_stop_on_chunksize(all_parsers):
# gh-3967: stopping iteration when chunksize is specified
parser = all_parsers
data = """A,B,C
foo,1,2,3
bar,4,5,6
baz,7,8,9
"""
reader = parser.read_csv(StringIO(data), chunksize=1)
result = list(reader)
assert len(result) == 3
expected = DataFrame(
[[1, 2, 3], [4, 5, 6], [7, 8, 9]],
index=["foo", "bar", "baz"],
columns=["A", "B", "C"],
)
tm.assert_frame_equal(concat(result), expected)
@pytest.mark.parametrize(
"kwargs", [dict(iterator=True, chunksize=1), dict(iterator=True), dict(chunksize=1)]
)
def test_iterator_skipfooter_errors(all_parsers, kwargs):
msg = "'skipfooter' not supported for 'iteration'"
parser = all_parsers
data = "a\n1\n2"
with pytest.raises(ValueError, match=msg):
parser.read_csv(StringIO(data), skipfooter=1, **kwargs)
def test_nrows_skipfooter_errors(all_parsers):
msg = "'skipfooter' not supported with 'nrows'"
data = "a\n1\n2\n3\n4\n5\n6"
parser = all_parsers
with pytest.raises(ValueError, match=msg):
parser.read_csv(StringIO(data), skipfooter=1, nrows=5)
@pytest.mark.parametrize(
"data,kwargs,expected",
[
(
"""foo,2,3,4,5
bar,7,8,9,10
baz,12,13,14,15
qux,12,13,14,15
foo2,12,13,14,15
bar2,12,13,14,15
""",
dict(index_col=0, names=["index", "A", "B", "C", "D"]),
DataFrame(
[
[2, 3, 4, 5],
[7, 8, 9, 10],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
],
index=Index(["foo", "bar", "baz", "qux", "foo2", "bar2"], name="index"),
columns=["A", "B", "C", "D"],
),
),
(
"""foo,one,2,3,4,5
foo,two,7,8,9,10
foo,three,12,13,14,15
bar,one,12,13,14,15
bar,two,12,13,14,15
""",
dict(index_col=[0, 1], names=["index1", "index2", "A", "B", "C", "D"]),
DataFrame(
[
[2, 3, 4, 5],
[7, 8, 9, 10],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
],
index=MultiIndex.from_tuples(
[
("foo", "one"),
("foo", "two"),
("foo", "three"),
("bar", "one"),
("bar", "two"),
],
names=["index1", "index2"],
),
columns=["A", "B", "C", "D"],
),
),
],
)
def test_pass_names_with_index(all_parsers, data, kwargs, expected):
parser = all_parsers
result = parser.read_csv(StringIO(data), **kwargs)
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize("index_col", [[0, 1], [1, 0]])
def test_multi_index_no_level_names(all_parsers, index_col):
data = """index1,index2,A,B,C,D
foo,one,2,3,4,5
foo,two,7,8,9,10
foo,three,12,13,14,15
bar,one,12,13,14,15
bar,two,12,13,14,15
"""
headless_data = "\n".join(data.split("\n")[1:])
names = ["A", "B", "C", "D"]
parser = all_parsers
result = parser.read_csv(
StringIO(headless_data), index_col=index_col, header=None, names=names
)
expected = parser.read_csv(StringIO(data), index_col=index_col)
# No index names in headless data.
expected.index.names = [None] * 2
tm.assert_frame_equal(result, expected)
def test_multi_index_no_level_names_implicit(all_parsers):
parser = all_parsers
data = """A,B,C,D
foo,one,2,3,4,5
foo,two,7,8,9,10
foo,three,12,13,14,15
bar,one,12,13,14,15
bar,two,12,13,14,15
"""
result = parser.read_csv(StringIO(data))
expected = DataFrame(
[
[2, 3, 4, 5],
[7, 8, 9, 10],
[12, 13, 14, 15],
[12, 13, 14, 15],
[12, 13, 14, 15],
],
columns=["A", "B", "C", "D"],
index=MultiIndex.from_tuples(
[
("foo", "one"),
("foo", "two"),
("foo", "three"),
("bar", "one"),
("bar", "two"),
]
),
)
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize(
"data,expected,header",
[
("a,b", DataFrame(columns=["a", "b"]), [0]),
(
"a,b\nc,d",
DataFrame(columns=MultiIndex.from_tuples([("a", "c"), ("b", "d")])),
[0, 1],
),
],
)
@pytest.mark.parametrize("round_trip", [True, False])
def test_multi_index_blank_df(all_parsers, data, expected, header, round_trip):
# see gh-14545
parser = all_parsers
data = expected.to_csv(index=False) if round_trip else data
result = parser.read_csv(StringIO(data), header=header)
tm.assert_frame_equal(result, expected)
def test_no_unnamed_index(all_parsers):
parser = all_parsers
data = """ id c0 c1 c2
0 1 0 a b
1 2 0 c d
2 2 2 e f
"""
result = parser.read_csv(StringIO(data), sep=" ")
expected = DataFrame(
[[0, 1, 0, "a", "b"], [1, 2, 0, "c", "d"], [2, 2, 2, "e", "f"]],
columns=["Unnamed: 0", "id", "c0", "c1", "c2"],
)
tm.assert_frame_equal(result, expected)
def test_read_csv_parse_simple_list(all_parsers):
parser = all_parsers
data = """foo
bar baz
qux foo
foo
bar"""
result = parser.read_csv(StringIO(data), header=None)
expected = DataFrame(["foo", "bar baz", "qux foo", "foo", "bar"])
tm.assert_frame_equal(result, expected)
@tm.network
def test_url(all_parsers, csv_dir_path):
# TODO: FTP testing
parser = all_parsers
kwargs = dict(sep="\t")
url = (
"https://raw.github.com/pandas-dev/pandas/master/"
"pandas/tests/io/parser/data/salaries.csv"
)
url_result = parser.read_csv(url, **kwargs)
local_path = os.path.join(csv_dir_path, "salaries.csv")
local_result = parser.read_csv(local_path, **kwargs)
tm.assert_frame_equal(url_result, local_result)
@pytest.mark.slow
def test_local_file(all_parsers, csv_dir_path):
parser = all_parsers
kwargs = dict(sep="\t")
local_path = os.path.join(csv_dir_path, "salaries.csv")
local_result = parser.read_csv(local_path, **kwargs)
url = "file://localhost/" + local_path
try:
url_result = parser.read_csv(url, **kwargs)
tm.assert_frame_equal(url_result, local_result)
except URLError:
# Fails on some systems.
pytest.skip("Failing on: " + " ".join(platform.uname()))
def test_path_path_lib(all_parsers):
parser = all_parsers
df = tm.makeDataFrame()
result = tm.round_trip_pathlib(df.to_csv, lambda p: parser.read_csv(p, index_col=0))
tm.assert_frame_equal(df, result)
def test_path_local_path(all_parsers):
parser = all_parsers
df = tm.makeDataFrame()
result = tm.round_trip_localpath(
df.to_csv, lambda p: parser.read_csv(p, index_col=0)
)
tm.assert_frame_equal(df, result)
def test_nonexistent_path(all_parsers):
# gh-2428: pls no segfault
# gh-14086: raise more helpful FileNotFoundError
# GH#29233 "File foo" instead of "File b'foo'"
parser = all_parsers
path = "{}.csv".format(tm.rands(10))
msg = f"File {path} does not exist" if parser.engine == "c" else r"\[Errno 2\]"
with pytest.raises(FileNotFoundError, match=msg) as e:
parser.read_csv(path)
filename = e.value.filename
assert path == filename
def test_missing_trailing_delimiters(all_parsers):
parser = all_parsers
data = """A,B,C,D
1,2,3,4
1,3,3,
1,4,5"""
result = parser.read_csv(StringIO(data))